RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NACA2Q9H009 215 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 GKN1Q9NS71 199 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PRKAG2Q9UGJ0 569 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 TLR6Q9Y2C9 796 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 CLUHO75153 1309 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PLXNA3P51805 1871 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 COL4A4P53420 1690 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 CFAP69A5D8W1 941 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PRRG1O14668 218 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 TEX28O15482 410 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 RGS16O15492 202 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 GCATO75600 419 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 FGF18O76093 207 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 FGBP02675 491 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 URODP06132 367 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 EIF3BP55884 814 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 RPL10AP62906 217 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 TWF1Q12792 350 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PRKD1Q15139 912 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 ALFQ53S48 1182 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 MS4A13Q5J8X5 152 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 BRMS1LQ5PSV4 323 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 C3orf62Q6ZUJ4 267 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 CAND1Q86VP6 1230 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 SLC39A13Q96H72 371 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 TRIM62Q9BVG3 475 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 OSBPL2Q9H1P3 480 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 BACE2Q9Y5Z0 518 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 DOCK6Q96HP0 2047 aa11.18□□□□□ -0.62
SNRPA1-211ENST00000560433 A0A0A0MRY4 1105 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 C5orf60A6NFR6 353 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 PPP1R12AO14974 1030 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 ALOX15BO15296 676 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 ABLIM3O94929 683 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 IRF1P10914 325 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 HMGA1P17096 107 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 LAG3P18627 525 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 PTPN3P26045 913 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 GARSP41250 739 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 MLLT6P55198 1093 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 TAF12Q16514 161 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 RFWD3Q6PCD5 774 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 LEKR1Q6ZMV7 388 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 BEND5Q7L4P6 421 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 CFAP52Q8N1V2 620 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 KLHL23Q8NBE8 558 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 IGSF8Q969P0 613 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF419Q96HQ0 510 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 SPATA13Q96N96 652 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 HAPLN3Q96S86 360 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 SLC39A8Q9C0K1 460 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 RNF38Q9H0F5 515 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 TSPYL1Q9H0U9 437 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 KLHL8Q9P2G9 620 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 AFF4Q9UHB7 1163 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 YIPF1Q9Y548 306 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 JCHAINP01591 159 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 MYOGP15173 224 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 HCAR3P49019 387 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 TUFMP49411 452 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 PPP2R5DQ14738 602 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF534Q76KX8 674 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 BZW1Q7L1Q6 419 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 HOOK3Q86VS8 718 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 PALM2Q8IXS6 379 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 CMTR2Q8IYT2 770 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 APOL2Q9BQE5 337 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 MRPL17Q9NRX2 175 aaKnown RBP11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 SMPD4Q9NXE4 827 aa11.17□□□□□ -0.62
SNRPA1-211ENST00000560433 KIAA1671Q9BY89 1806 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 EXOC1LA0A1B0GW35 172 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ERICH4A6NGS2 130 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 CHADO15335 359 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 APOEP02649 317 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 CNPP09543 421 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 GCAP28676 217 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ALDH1A3P47895 512 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 FPGSQ05932 587 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 SMARCB1Q12824 385 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 FBXL22Q6P050 247 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 OTOP3Q7RTS5 596 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 TMC7Q7Z402 723 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 DDX53Q86TM3 631 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF354CQ86Y25 554 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ARHGAP12Q8IWW6 846 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ARHGAP18Q8N392 663 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 FIBCD1Q8N539 461 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 FBF1Q8TES7 1133 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 WBP2Q969T9 261 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms