RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CKMT2P17540 419 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 GLDCP23378 1020 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 ACTN2P35609 894 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 CXADRP78310 365 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 INSM1Q01101 510 aaPredicted RBP20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 CCDC173Q0VFZ6 552 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 BSPRYQ5W0U4 402 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 RFWD3Q6PCD5 774 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 KDM1BQ8NB78 822 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 WBP1Q96G27 269 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 FAXDC2Q96IV6 333 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 CLCA2Q9UQC9 943 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 TRAF3IP3Q9Y228 551 aa20.55■□□□□ 0.88
RABGGTA-214ENST00000560163 COL6A6A6NMZ7 2263 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 YJEFN3A6XGL0 299 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 E7ENQ6 273 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 IGLV3-27P01718 113 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 PDIA4P13667 645 aaKnown RBP20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 ACP1P24666 158 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 SLC6A4P31645 630 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 SFSWAPQ12872 951 aaKnown RBP20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 FAM133BQ5BKY9 247 aaKnown RBP20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 SPATS2Q86XZ4 545 aaKnown RBP20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 AADATQ8N5Z0 425 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 FIBINQ8TAL6 211 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 EDEM1Q92611 657 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 FAM129BQ96TA1 746 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 CISHQ9NSE2 258 aa20.54■□□□□ 0.88
RABGGTA-214ENST00000560163 GOLGA6L7A0A1B0GV03 622 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 XPO1O14980 1071 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 MSI1O43347 362 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 LATO43561 262 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 TBL1XO60907 577 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 RNASEH1O60930 286 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 RNASEH2AO75792 299 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 SLC8A1P32418 973 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 ENPEPQ07075 957 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 KCNH2Q12809 1159 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 PROX2Q3B8N5 592 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 KMT5BQ4FZB7 885 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 INTS8Q75QN2 995 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 MMAAQ8IVH4 418 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 DHX40Q8IX18 779 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 TTC39CQ8N584 583 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 SEMA4DQ92854 862 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 INTS4Q96HW7 963 aaKnown RBP20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 SERAC1Q96JX3 654 aa20.53■□□□□ 0.88
RABGGTA-214ENST00000560163 TARSL2A2RTX5 802 aaKnown RBP20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 IRAK2O43187 625 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 ASLP04424 464 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 CSKP41240 450 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 SLC8A3P57103 927 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 ST8SIA6P61647 398 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 NFIL3Q16649 462 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 SCML4Q8N228 414 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 OXR1Q8N573 874 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 MFSD2AQ8NA29 543 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 RNF139Q8WU17 664 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 HIC2Q96JB3 615 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 ZNF396Q96N95 335 aaPredicted RBP20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 OMDQ99983 421 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 TMEM8AQ9HCN3 771 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 ABCC13Q9NSE7 274 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 ARHGAP20Q9P2F6 1191 aa20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 TPX2Q9ULW0 747 aaKnown RBP20.52■□□□□ 0.88
RABGGTA-214ENST00000560163 HECTD1Q9ULT8 2610 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 GOT1P17174 413 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 ADPRHP54922 357 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 PKDCCQ504Y2 493 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 MSANTD2Q6P1R3 559 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 SND1Q7KZF4 910 aaKnown RBP eCLIP20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 MFN1Q8IWA4 741 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 ZNF557Q8N988 423 aaPredicted RBP20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 TATDN2Q93075 761 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 AZIN2Q96A70 460 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 MYEOVQ96EZ4 313 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 PAGE5Q96GU1 130 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 EXOC1Q9NV70 894 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 SERTAD1Q9UHV2 236 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 PCDHA7Q9UN72 937 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 ERVW-1Q9UQF0 538 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 ITIH6Q6UXX5 1313 aa20.51■□□□□ 0.87
RABGGTA-214ENST00000560163 TTC34A8MYJ7 566 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 ACTN4O43707 911 aaKnown RBP20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 CALUO43852 315 aaPredicted RBP20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 RHDQ02161 417 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 ADIGQ0VDE8 80 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 SLC45A4Q5BKX6 768 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 NADSYN1Q6IA69 706 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 CCDC150Q8NCX0 1101 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 ZNF248Q8NDW4 579 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 OR14C36Q8NHC7 312 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 KCTD13Q8WZ19 329 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 FAM131CQ96AQ9 280 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 PRICKLE1Q96MT3 831 aaPredicted RBP20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 SEMA4CQ9C0C4 833 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 LRRC4Q9HBW1 653 aa20.5■□□□□ 0.87
RABGGTA-214ENST00000560163 TSPAN16Q9UKR8 245 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms