RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CDH24Q86UP0 819 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 IQCHQ86VS3 1027 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 CCDC13Q8IYE1 715 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 CSGALNACT2Q8N6G5 542 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZNF366Q8N895 744 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 WASF1Q92558 559 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 USP7Q93009 1102 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 HDAC11Q96DB2 347 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 PCED1BQ96HM7 432 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 PLIN2Q99541 437 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 EPAS1Q99814 870 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 SYNDIG1Q9H7V2 258 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 TMEM30AQ9NV96 361 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 FBXO10Q9UK96 956 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 CYP46A1Q9Y6A2 500 aa9.79□□□□□ -0.84
PPP1R3E-204ENST00000559942 MKRN2OSH3BPM6 223 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 CASC3O15234 703 aaKnown RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 PIAS2O75928 621 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 LIFP15018 202 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 ITIH1P19827 911 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 ITGA3P26006 1051 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 YWHAQP27348 245 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 RNASE9P60153 205 aaKnown RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 FGL2Q14314 439 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 INPP5JQ15735 1006 aaPredicted RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 BMT2Q1RMZ1 405 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 ZRANB3Q5FWF4 1079 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 USP30Q70CQ3 517 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 B3GNT8Q7Z7M8 397 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 KCTD17Q8N5Z5 321 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 IL22RA1Q8N6P7 574 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 TOP6BLQ8N6T0 577 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 C1orf127Q8N9H9 656 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 OR2T34Q8NGX1 318 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 GPBAR1Q8TDU6 330 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 GTF3C6Q969F1 213 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 NKD1Q969G9 470 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 C8orf48Q96LL4 319 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 TIPINQ9BVW5 301 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 CIPCQ9C0C6 399 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 IKZF4Q9H2S9 585 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 GSX1Q9H4S2 264 aaPredicted RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 ELOVL2Q9NXB9 296 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 NCKIPSDQ9NZQ3 722 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 LARSQ9P2J5 1176 aaKnown RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 KCNG1Q9UIX4 513 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 KCND3Q9UK17 655 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 AGO2Q9UKV8 859 aaKnown RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 CDH9Q9ULB4 789 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 SLC27A6Q9Y2P4 619 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 ABCA4P78363 2273 aa9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
PPP1R3E-204ENST00000559942 TNRC6AQ8NDV7 1962 aaKnown RBP9.77□□□□□ -0.84
PPP1R3E-204ENST00000559942 DCHS2Q6V1P9 2916 aa9.77□□□□□ -0.84
PPP1R3E-204ENST00000559942 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 H0YCG3 227 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CLDN5O00501 218 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 RIOK3O14730 519 aaKnown RBP9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 SCAMP1O15126 338 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 GREM1O60565 184 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 PIGRP01833 764 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 PRKAR1AP10644 381 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CAPN3P20807 821 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CLCN1P35523 988 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 MFAP3P55082 362 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 GUCY1B3Q02153 619 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 ARID5AQ03989 594 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 PERM1Q5SV97 790 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 KRT79Q5XKE5 535 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 ZCCHC8Q6NZY4 707 aaKnown RBP9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CRELD2Q6UXH1 353 aaPredicted RBP9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 HTR3DQ70Z44 454 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CCDC83Q8IWF9 413 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 PDZD8Q8NEN9 1154 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 SCAMP5Q8TAC9 235 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 KBTBD7Q8WVZ9 684 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 GOLGA1Q92805 767 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 CEP295NLQ96MC4 621 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 ZNF518BQ9C0D4 1074 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 FBRSQ9HAH7 460 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 KLHL11Q9NVR0 708 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 FBXL12Q9NXK8 326 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 GDAP2Q9NXN4 497 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 TPX2Q9ULW0 747 aaKnown RBP9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 LOXL2Q9Y4K0 774 aa9.77□□□□□ -0.85
PPP1R3E-204ENST00000559942 C9orf172C9J069 976 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 STMND1H3BQB6 276 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 CAPN5O15484 640 aaPredicted RBP9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 PRICKLE3O43900 615 aaPredicted RBP9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 CDC45O75419 566 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 NEBLO76041 1014 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 TBX18O95935 607 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 PGFP49763 221 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 MAPK10P53779 464 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 LTBQ06643 244 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 TRIM29Q14134 588 aa9.76□□□□□ -0.85
PPP1R3E-204ENST00000559942 STAT4Q14765 748 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms