RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PAGR1Q9BTK6 254 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.23□□□□□ -1.733e-6■□□□□ 8.9
SPG11-218ENST00000559754 TMX4Q9H1E5 349 aaPredicted RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 FZD3Q9NPG1 666 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 HELLSQ9NRZ9 838 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 RGL1Q9NZL6 768 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 MSRB1Q9NZV6 116 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 UBE2J1Q9Y385 318 aaPredicted RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 MORC2Q9Y6X9 1032 aaPredicted RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 DPPA5A6NC42 116 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 F5H423 210 aaPredicted RBP4.22□□□□□ -1.73
SPG11-218ENST00000559754 NPC1O15118 1278 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 NDUFB8O95169 186 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 EPN2O95208 641 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 NDST3O95803 873 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 ALADP13716 330 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 KCNJ4P48050 445 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 ARL6IP4Q66PJ3 421 aaKnown RBP4.22□□□□□ -1.73
SPG11-218ENST00000559754 KIAA1161Q6NSJ0 714 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 HIBCHQ6NVY1 386 aaPredicted RBP4.22□□□□□ -1.73
SPG11-218ENST00000559754 ZNF549Q6P9A3 640 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 FBXO38Q6PIJ6 1188 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 MMS22LQ6ZRQ5 1243 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 RASGRP3Q8IV61 690 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 ARL14EPQ8N8R7 260 aaPredicted RBP4.22□□□□□ -1.73
SPG11-218ENST00000559754 GLIS1Q8NBF1 620 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 ADPRHL1Q8NDY3 354 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 THOC3Q96J01 351 aaKnown RBP4.22□□□□□ -1.73
SPG11-218ENST00000559754 FAR2Q96K12 515 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 SGCZQ96LD1 299 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 CCDC138Q96M89 665 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 GDF15Q99988 308 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 MLXIPQ9HAP2 919 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 THSD1Q9NS62 852 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 GJB4Q9NTQ9 266 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 PCDHA12Q9UN75 941 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 COG5Q9UP83 839 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 PCDHB7Q9Y5E2 793 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 DGKBQ9Y6T7 804 aa4.22□□□□□ -1.73
SPG11-218ENST00000559754 KIR2DS5A0A0G2JLQ3 304 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 FAM234BA2RU67 622 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 KIR2DS3K7RE56 304 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 HNRNPDLO14979 420 aaKnown RBP4.21□□□□□ -1.74
SPG11-218ENST00000559754 FGF2P09038 288 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 T-ENOLP0DO92 83 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 TNFRSF1BP20333 461 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 DDIT3P35638 169 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 SIM2Q14190 667 aaPredicted RBP4.21□□□□□ -1.74
SPG11-218ENST00000559754 PDCD2Q16342 344 aaPredicted RBP4.21□□□□□ -1.74
SPG11-218ENST00000559754 LRIG3Q6UXM1 1119 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 MEPCEQ7L2J0 689 aaKnown RBP4.21□□□□□ -1.74
SPG11-218ENST00000559754 SPATA5Q8NB90 893 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 DEPTORQ8TB45 409 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 ADAMTS15Q8TE58 950 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 POF1BQ8WVV4 589 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 CENPIQ92674 756 aaPredicted RBP4.21□□□□□ -1.74
SPG11-218ENST00000559754 ZNF566Q969W8 418 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 PAAF1Q9BRP4 392 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 PIMREGQ9BSJ6 248 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 ELOVL1Q9BW60 279 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 HIPK2Q9H2X6 1198 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 NECTIN3Q9NQS3 549 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 TM7SF3Q9NS93 570 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 C9orf78Q9NZ63 289 aaPredicted RBP4.21□□□□□ -1.74
SPG11-218ENST00000559754 SLC8A2Q9UPR5 921 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 CEP83Q9Y592 693 aa4.21□□□□□ -1.74
SPG11-218ENST00000559754 PNMA6EA0A0J9YXQ4 647 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 TMEM272A0A1B0GTI8 110 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 GXYLT2A0PJZ3 443 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 J3KTA2 159 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 SMAD6O43541 496 aaKnown RBP4.2□□□□□ -1.74
SPG11-218ENST00000559754 FGF18O76093 207 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 GLP2RO95838 553 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 HARSP12081 509 aaKnown RBP4.2□□□□□ -1.74
SPG11-218ENST00000559754 TGM2P21980 687 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 CDKN2AP42771 156 aaKnown RBP4.2□□□□□ -1.74
SPG11-218ENST00000559754 PGGT1BP53609 377 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 NANOS2P60321 138 aaKnown RBP4.2□□□□□ -1.74
SPG11-218ENST00000559754 PMS2P11Q13670 270 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 ERV3-1Q14264 604 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 PTGR1Q14914 329 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 SMTNL2Q2TAL5 461 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 FAM209BQ5JX69 171 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 WDR93Q6P2C0 686 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 ZNF474Q6S9Z5 364 aaPredicted RBP4.2□□□□□ -1.74
SPG11-218ENST00000559754 CLMNQ96JQ2 1002 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 GPR78Q96P69 363 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 WDR83Q9BRX9 315 aaKnown RBP4.2□□□□□ -1.74
SPG11-218ENST00000559754 ABHD14AQ9BUJ0 271 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 KCNK9Q9NPC2 374 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 DTNAQ9Y4J8 743 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 TTC3P53804 2025 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 CNTNAP2Q9UHC6 1331 aa4.2□□□□□ -1.74
SPG11-218ENST00000559754 A0A0G2JK05 382 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 hCG_1642624A0A1W2PR95 340 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 RASA4BC9J798 803 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 PODXLO00592 558 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 RASA4O43374 803 aa4.19□□□□□ -1.74
SPG11-218ENST00000559754 LDHCP07864 332 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms