RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 GALR2O43603 387 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 RNF8O76064 485 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 CNTN5O94779 1100 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 DESP17661 470 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 CD70P32970 193 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 TIE1P35590 1138 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 MAGEA1P43355 309 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 MRPS21P82921 87 aaKnown RBP20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 SCAPQ12770 1279 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 FAM72AQ5TYM5 149 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 FAM72DQ6L9T8 149 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 FAM72BQ86X60 149 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 MFN1Q8IWA4 741 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 MAML2Q8IZL2 1156 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 CCAR2Q8N163 923 aaKnown RBP20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 RPLP0P6Q8NHW5 317 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 ZNF564Q8TBZ8 553 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 IER2Q9BTL4 223 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 ZDHHC4Q9NPG8 344 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 UVRAGQ9P2Y5 699 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 OR12D3Q9UGF7 316 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 ANAPC7Q9UJX3 599 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 FZD10Q9ULW2 581 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 DOCK4Q8N1I0 1966 aa20.93■□□□□ 0.94
TSPAN3-207ENST00000559494 E9PAM4 449 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 SRGAP2O75044 1071 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 LRCH4O75427 683 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 MIPP30301 263 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 CYLC1P35663 651 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 NRG1Q02297 640 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 LMAN2Q12907 356 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 PIGHQ14442 188 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 ACAP1Q15027 740 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 ALFQ53S48 1182 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 TTC39BQ5VTQ0 682 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 DAB2IPQ5VWQ8 1189 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 LRRC31Q6UY01 552 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 RAD9BQ6WBX8 426 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 ANKS1BQ7Z6G8 1248 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 PYROXD2Q8N2H3 581 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 CCDC26Q8TAB7 109 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 SLC35G2Q8TBE7 412 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 PEBP4Q96S96 227 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 BAG1Q99933 345 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 PCSK1NQ9UHG2 260 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 IP6K2Q9UHH9 426 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 GGA2Q9UJY4 613 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 INTUQ9ULD6 942 aa20.92■□□□□ 0.94
TSPAN3-207ENST00000559494 MUC6Q6W4X9 2439 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 A0A1B0GVM2 712 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 TCAF2A6NFQ2 919 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 EIF3CLB5ME19 914 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 H0Y626 953 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 MYO1FO00160 1098 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 PABPC1P11940 636 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 SATB1Q01826 763 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 CDH18Q13634 790 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 MANEALQ5VSG8 457 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 CYP4V2Q6ZWL3 525 aaPredicted RBP20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 ADIPOR2Q86V24 386 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 CCDC33Q8N5R6 958 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 ZNF557Q8N988 423 aaPredicted RBP20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 IL17RCQ8NAC3 791 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 KCNV2Q8TDN2 545 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 EIF3CQ99613 913 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 OSGEPQ9NPF4 335 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 GPATCH2LQ9NWQ4 482 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 ELOVL2Q9NXB9 296 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 MPP6Q9NZW5 540 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 INTS6Q9UL03 887 aaKnown RBP20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 PCDHA13Q9Y5I0 950 aa20.91■□□□□ 0.94
TSPAN3-207ENST00000559494 LAMTOR5O43504 91 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 ATG13O75143 517 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 CLDN11O75508 207 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 NDUFA10O95299 355 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 KLF8O95600 359 aaPredicted RBP20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 TCF4P15884 667 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 HOXC13P31276 330 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 PCK1P35558 622 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 CXCL12P48061 93 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 AIF1P55008 147 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 CDH4P55283 916 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 EGFLAMQ63HQ2 1017 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 CXorf57Q6NSI4 855 aaKnown RBP20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 CHST9Q7L1S5 443 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 CCDC117Q8IWD4 279 aaPredicted RBP20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 ALLCQ8N6M5 410 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 ZNF513Q8N8E2 541 aaPredicted RBP20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 NIPA2Q8N8Q9 360 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 PRSS33Q8NF86 280 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 OR52K2Q8NGK3 314 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 WFIKKN2Q8TEU8 576 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 SORCS1Q8WY21 1168 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 ACOX2Q99424 681 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 NCAPGQ9BPX3 1015 aa20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 KIAA1522Q9P206 1035 aaPredicted RBP20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 PPARGC1AQ9UBK2 798 aaKnown RBP20.9■□□□□ 0.94
TSPAN3-207ENST00000559494 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.89■□□□□ 0.93
TSPAN3-207ENST00000559494 TIMM44O43615 452 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms