RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HMBSP08397 361 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 BMP4P12644 408 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 CORO1AP31146 461 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 USP8P40818 1118 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FNTBP49356 437 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 GPLD1P80108 840 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 COG7P83436 770 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 MYL5Q02045 173 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 GAD2Q05329 585 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 KDSRQ06136 332 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PPP2R5DQ14738 602 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 NCAPHQ15003 741 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 KLHDC7AQ5VTJ3 777 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 BTBD8Q5XKL5 378 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 MSANTD2Q6P1R3 559 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 NAT16Q8N8M0 369 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 SUMF1Q8NBK3 374 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 USP33Q8TEY7 942 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 IRGQQ8WZA9 623 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PNKPQ96T60 521 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 LSM14BQ9BX40 385 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 NAA15Q9BXJ9 866 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FAM126AQ9BYI3 521 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 MIS12Q9H081 205 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 HSD3B7Q9H2F3 369 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 RASSF4Q9H2L5 321 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 SEMA4AQ9H3S1 761 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ARHGEF4Q9NR80 690 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ABCC13Q9NSE7 274 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 OLA1Q9NTK5 396 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 DNAJB12Q9NXW2 375 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 SFMBT1Q9UHJ3 866 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 STRIP2Q9ULQ0 834 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 A0A0A0MRY4 1105 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 E5RJQ4 531 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 NEDD8-MDP1E9PL57 170 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FOXN3O00409 490 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PAPSS1O43252 624 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 MSI1O43347 362 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 MED7O43513 233 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 CACNG3O60359 315 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FBXO21O94952 628 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PENKP01210 267 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 LMNAP02545 664 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FYNP06241 537 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 TYRP14679 529 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 UCHL3P15374 230 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ZNF18P17022 549 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 HOXA6P31267 233 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 GRIA2P42262 883 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 KLK7P49862 253 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PDCLQ13371 301 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 DRAP1Q14919 205 aaPredicted RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ANO4Q32M45 955 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 CAVIN1Q6NZI2 390 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 TPGS1Q6ZTW0 290 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 SYT13Q7L8C5 426 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 APTXQ7Z2E3 356 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 SLC47A2Q86VL8 602 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FMNL3Q8IVF7 1028 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FAM217AQ8IXS0 508 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 FAM71AQ8IYT1 594 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 WDTC1Q8N5D0 677 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 AOPEPQ8N6M6 819 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 RNF139Q8WU17 664 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ATRIPQ8WXE1 791 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ACDQ96AP0 544 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PLD4Q96BZ4 506 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PIWIL1Q96J94 861 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 BBS2Q9BXC9 721 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 VPS16Q9H269 839 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 GANQ9H2C0 597 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 EPC1Q9H2F5 836 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 ST7Q9NRC1 585 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 PLK2Q9NYY3 685 aa6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 AGO1Q9UL18 857 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 HBS1LQ9Y450 684 aaKnown RBP6.28□□□□□ -1.4
CTDSPL2-204ENST00000558966 DCHS1Q96JQ0 3298 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 F8VZ95 297 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 GFRA2O00451 464 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 EPHB6O15197 1021 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 ATG13O75143 517 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 IGLV3-27P01718 113 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 APODP05090 189 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 HNRNPLP14866 589 aaKnown RBP eCLIP6.27□□□□□ -1.419e-11■■■□□ 16.5
CTDSPL2-204ENST00000558966 KIR2DL1P43626 348 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 ACADSBP45954 432 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 PXNP49023 591 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 COPB1P53618 953 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 SRSF5Q13243 272 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 RAPGEF1Q13905 1077 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 DMC1Q14565 340 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 PTPN20Q4JDL3 420 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 C2orf27AQ580R0 203 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 EMC10Q5UCC4 262 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 FYB2Q5VWT5 728 aa6.27□□□□□ -1.41
CTDSPL2-204ENST00000558966 HEATR6Q6AI08 1181 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms