RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 FAM102AQ5T9C2 384 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 DHX40Q8IX18 779 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 AHI1Q8N157 1196 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 FIBINQ8TAL6 211 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 DDX1Q92499 740 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 PRCCQ92733 491 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 IGSF8Q969P0 613 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 C18orf8Q96DM3 657 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 RPL10LQ96L21 214 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 PRSS16Q9NQE7 514 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 ANLNQ9NQW6 1124 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 SLC12A6Q9UHW9 1150 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 SLCO3A1Q9UIG8 710 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 VANGL2Q9ULK5 521 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 TTC34A8MYJ7 566 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 GIPC1O14908 333 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF217O75362 1048 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 DAB1O75553 588 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ADCY5O95622 1261 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ATP5BP06576 529 aaKnown RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 DLDP09622 509 aaKnown RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ACADMP11310 421 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF18P17022 549 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 CHRNB2P17787 502 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ABCB4P21439 1286 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 CD6P30203 668 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 STK19P49842 368 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 TPMTP51580 245 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 MYL5Q02045 173 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 UBXN1Q04323 297 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 NNTQ13423 1086 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 NCAPHQ15003 741 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ANO6Q4KMQ2 910 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 RAB6CQ53S08 254 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 PITRM1Q5JRX3 1037 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 OTUD1Q5VV17 481 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 CAVIN1Q6NZI2 390 aaKnown RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 BEND5Q7L4P6 421 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 SYT12Q8IV01 421 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 OR2T3Q8NH03 318 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 GANCQ8TET4 914 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 TBCBQ99426 244 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 TRIM62Q9BVG3 475 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 RAB6CQ9H0N0 254 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 TMEM245Q9H330 911 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ITM2CQ9NQX7 267 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 PIGVQ9NUD9 493 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 PILRBQ9UKJ0 227 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 ERVW-1Q9UQF0 538 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 SIK3Q9Y2K2 1263 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 HS3ST4Q9Y661 456 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 CKAP5Q14008 2032 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 TNRC6BQ9UPQ9 1833 aaKnown RBP12.94□□□□□ -0.34
SMAD3-208ENST00000558827 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
SMAD3-208ENST00000558827 MEI4A8MW99 385 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 CDX4O14627 284 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 NPC1O15118 1278 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 SIN3BO75182 1162 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 PAGE1O75459 146 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 MBD3O95983 291 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 GLI1P08151 1106 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 ENGP17813 658 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 CCR1P32246 355 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 NOS2P35228 1153 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 SOX5P35711 763 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 FLT3P36888 993 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 RPS14P62263 151 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 EIF4EBP2Q13542 120 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 CAMK2GQ13555 558 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 AUHQ13825 339 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 MPP7Q5T2T1 576 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 TRNP1Q6NT89 227 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 SLC26A9Q7LBE3 791 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 CCAR2Q8N163 923 aaKnown RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 EMC1Q8N766 993 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 NEK11Q8NG66 645 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 OR52K2Q8NGK3 314 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 EPS8L1Q8TE68 723 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 SNX19Q92543 992 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 TTC17Q96AE7 1141 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 MRGPRX3Q96LB0 322 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 RPRD1AQ96P16 312 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-208ENST00000558827 SPAG5Q96R06 1193 aa12.93□□□□□ -0.34
SMAD3-208ENST00000558827 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms