RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PXNP49023 591 aaPredicted RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 HARS2P49590 506 aaKnown RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 CXCR3P49682 368 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 SULT1E1P49888 294 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 GALCP54803 685 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 NME3Q13232 169 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 LRRC32Q14392 662 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 C15orf59Q2T9L4 293 aaPredicted RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 DNAJC24Q6P3W2 148 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 VPS36Q86VN1 386 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 CPA6Q8N4T0 437 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 CENPIQ92674 756 aaPredicted RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 MYEOVQ96EZ4 313 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 PANX2Q96RD6 677 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 EDEM2Q9BV94 578 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 SELENOOQ9BVL4 669 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 PACSIN1Q9BY11 444 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 TRIM7Q9C029 511 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 FAM204AQ9H8W3 233 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 SPTLC3Q9NUV7 552 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 RRN3Q9NYV6 651 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 COX16Q9P0S2 106 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 CNOT8Q9UFF9 292 aaKnown RBP16.09■□□□□ 0.17
LINC01220-201ENST00000558575 ZNF510Q9Y2H8 683 aa16.09■□□□□ 0.17
LINC01220-201ENST00000558575 MYOFQ9NZM1 2061 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 C4orf47A7E2U8 309 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 TRDMT1O14717 391 aaKnown RBP16.08■□□□□ 0.16
LINC01220-201ENST00000558575 ACSL4O60488 711 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 ABCB4P21439 1286 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 SLC6A4P31645 630 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 OPRD1P41143 372 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 SLC6A11P48066 632 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 MESP2Q0VG99 397 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 ADGRF1Q5T601 910 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 NUGGCQ68CJ6 796 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 PKN3Q6P5Z2 889 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 TPGS1Q6ZTW0 290 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 C12orf40Q86WS4 652 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 RALGPS2Q86X27 583 aaPredicted RBP16.08■□□□□ 0.16
LINC01220-201ENST00000558575 UNC45BQ8IWX7 931 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 CPXM2Q8N436 756 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 ZNF653Q96CK0 615 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 ARHGEF26Q96DR7 871 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 CCDC42Q96M95 316 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 THAP2Q9H0W7 228 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 PARVAQ9NVD7 372 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC01220-201ENST00000558575 MARK1Q9P0L2 795 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 PCDHGA5Q9Y5G8 931 aa16.08■□□□□ 0.16
LINC01220-201ENST00000558575 ADAMTS9Q9P2N4 1935 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 BPTFQ12830 3046 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 TMEM191CA6NGB0 347 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 HOXC11O43248 304 aaPredicted RBP16.07■□□□□ 0.16
LINC01220-201ENST00000558575 AKR1B10O60218 316 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 LATS1O95835 1130 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 CYP1A2P05177 515 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 GPD1P21695 349 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 GBP1P32455 592 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 PTPN9P43378 593 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 GALK1P51570 392 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 ATP11AP98196 1134 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 ARTNQ5T4W7 220 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 TMPRSS4Q9NRS4 437 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 IMPACTQ9P2X3 320 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 MYO1AQ9UBC5 1043 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 ACACAQ13085 2346 aa16.07■□□□□ 0.16
LINC01220-201ENST00000558575 ANKRD62A6NC57 917 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 TRIM24O15164 1050 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 TSPAN3O60637 253 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
LINC01220-201ENST00000558575 F9P00740 461 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 MYBL1P10243 752 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 ADH5P11766 374 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 SDC4P31431 198 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 CCR1P32246 355 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 SGSHP51688 502 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 ZNF143P52747 638 aaPredicted RBP16.06■□□□□ 0.16
LINC01220-201ENST00000558575 HDAC4P56524 1084 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 GAD2Q05329 585 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 DEUP1Q05D60 604 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 NR1H3Q13133 447 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 FYB2Q5VWT5 728 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 KIAA1211LQ6NV74 962 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 RFWD3Q6PCD5 774 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 TMEM139Q8IV31 216 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 ARFGAP1Q8N6T3 406 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 EZH1Q92800 747 aaPredicted RBP16.06■□□□□ 0.16
LINC01220-201ENST00000558575 PRMT1Q99873 361 aaKnown RBP16.06■□□□□ 0.16
LINC01220-201ENST00000558575 MAGEB5Q9BZ81 275 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 ARHGEF38Q9NXL2 777 aa16.06■□□□□ 0.16
LINC01220-201ENST00000558575 PLK2Q9NYY3 685 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms