RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 IL31Q6EBC2 164 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 MRPL14Q6P1L8 145 aaKnown RBP11.84□□□□□ -0.51
LINC00648-204ENST00000557749 SERPINA13PQ6UXR4 307 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00648-204ENST00000557749 CEP76Q8TAP6 659 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
LINC00648-204ENST00000557749 RMDN1Q96DB5 314 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 PIWIL1Q96J94 861 aaKnown RBP11.84□□□□□ -0.51
LINC00648-204ENST00000557749 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 FAM204AQ9H8W3 233 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 PLK2Q9NYY3 685 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 GMPR2Q9P2T1 348 aaKnown RBP11.84□□□□□ -0.51
LINC00648-204ENST00000557749 STON1Q9Y6Q2 735 aa11.84□□□□□ -0.51
LINC00648-204ENST00000557749 A0A1W2PQF6 199 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 BECN2A8MW95 431 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 PIK3R2O00459 728 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 KHNYNO15037 678 aaKnown RBP11.83□□□□□ -0.52
LINC00648-204ENST00000557749 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
LINC00648-204ENST00000557749 MSI1O43347 362 aaKnown RBP11.83□□□□□ -0.52
LINC00648-204ENST00000557749 CCDC172P0C7W6 258 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 UCHL3P15374 230 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 PTMSP20962 102 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 ST8SIA6P61647 398 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 ZBTB16Q05516 673 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 MESP2Q0VG99 397 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 SLC12A1Q13621 1099 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 CDH18Q13634 790 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 ENPP2Q13822 863 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 DRAP1Q14919 205 aaPredicted RBP11.83□□□□□ -0.52
LINC00648-204ENST00000557749 DCAF6Q58WW2 860 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 RABGAP1LQ5R372 815 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 SYCP2LQ5T4T6 812 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 PIK3R6Q5UE93 754 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 GJB7Q6PEY0 223 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC00648-204ENST00000557749 SLC26A9Q7LBE3 791 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 MFN1Q8IWA4 741 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 KDM1BQ8NB78 822 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 SUSD2Q9UGT4 822 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 GGA2Q9UJY4 613 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 CEP250Q9BV73 2442 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 PLXND1Q9Y4D7 1925 aa11.83□□□□□ -0.52
LINC00648-204ENST00000557749 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 F5H5T6 163 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 FOXN3O00409 490 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 NDUFS2O75306 463 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 DAB1O75553 588 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 TRUB2O95900 331 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 F9P00740 461 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 DLDP09622 509 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 ACADMP11310 421 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 PABPC1P11940 636 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CYP11B1P15538 503 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 GABRG2P18507 467 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 POLR2EP19388 210 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CDH5P33151 784 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 NOS2P35228 1153 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 NNMTP40261 264 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 DHPSP49366 369 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SULT2A1Q06520 285 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 GEN1Q17RS7 908 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CDKAL1Q5VV42 579 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 DAB2IPQ5VWQ8 1189 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 RNF43Q68DV7 783 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 TRIM72Q6ZMU5 477 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CHST9Q7L1S5 443 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 TAC4Q86UU9 113 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SYT12Q8IV01 421 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SFTPA1Q8IWL2 248 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 ZNF397Q8NF99 534 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CLEC4CQ8WTT0 213 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 PRCCQ92733 491 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 RNF34Q969K3 372 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SLC39A13Q96H72 371 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 FCRL2Q96LA5 508 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SLC2A13Q96QE2 648 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SPAG5Q96R06 1193 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 LSM14BQ9BX40 385 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 NUSAP1Q9BXS6 441 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 PCED1AQ9H1Q7 454 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 PRDM16Q9HAZ2 1276 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SIX2Q9NPC8 291 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SAMSN1Q9NSI8 373 aaKnown RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 CACNA2D2Q9NY47 1150 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 SUN2Q9UH99 717 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 EVLQ9UI08 416 aaPredicted RBP11.82□□□□□ -0.52
LINC00648-204ENST00000557749 NAALADL1Q9UQQ1 740 aa11.82□□□□□ -0.52
LINC00648-204ENST00000557749 KCNU1A8MYU2 1149 aa11.81□□□□□ -0.52
LINC00648-204ENST00000557749 F8VZ95 297 aa11.81□□□□□ -0.52
LINC00648-204ENST00000557749 TRIM24O15164 1050 aa11.81□□□□□ -0.52
LINC00648-204ENST00000557749 TSPAN3O60637 253 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms