RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ARRDC3Q96B67 414 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 REPS1Q96D71 796 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 RBM17Q96I25 401 aaKnown RBP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 HS6ST2Q96MM7 605 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 PIGSQ96S52 555 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 SEC62Q99442 399 aaKnown RBP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 ADGRE3Q9BY15 652 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 UBN1Q9NPG3 1134 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 SEMA5BQ9P283 1151 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 ENTPD2Q9Y5L3 495 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 COPG1Q9Y678 874 aaKnown RBP5.17□□□□□ -1.58
PRPF39-212ENST00000557477 PREX1Q8TCU6 1659 aa5.17□□□□□ -1.58
PRPF39-212ENST00000557477 FHOD3Q2V2M9 1422 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 YEATS2Q9ULM3 1422 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CYP3A7-CYP3A51PA0A087WV96 503 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 A6NLC8 198 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 PRRT4C9JH25 899 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 GRM8O00222 908 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CLIC1O00299 241 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 PRYO14603 147 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 FOXN1O15353 648 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 HNRNPRO43390 633 aaKnown RBP5.16□□□□□ -1.58
PRPF39-212ENST00000557477 FZD7O75084 574 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 MT-CO3P00414 261 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 ALDOAP04075 364 aaKnown RBP5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CYP2D6P10635 497 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 LYL1P12980 280 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CPA1P15085 419 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CHN1P15882 459 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 XBP1P17861 261 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 IGFBP2P18065 325 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CYP3A7P24462 503 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 SLC8A1P32418 973 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 STAT6P42226 847 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 KCNB1Q14721 858 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 ANKRD1Q15327 319 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 FAM153CQ494X1 144 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 ATG16L1Q676U5 607 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 TMED8Q6PL24 325 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-212ENST00000557477 TRIM72Q6ZMU5 477 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 DCDC5Q6ZRR9 648 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 GRASPQ7Z6J2 395 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-212ENST00000557477 AMIGO2Q86SJ2 522 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 LAS2Q8IYD9 372 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 PTGR2Q8N8N7 351 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-212ENST00000557477 DAZAP1Q96EP5 407 aaKnown RBP5.16□□□□□ -1.58
PRPF39-212ENST00000557477 GPR63Q9BZJ6 419 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 CLPBQ9H078 707 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 PDE11AQ9HCR9 933 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 ASB6Q9NWX5 421 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 PACSIN3Q9UKS6 424 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 B3GNT3Q9Y2A9 372 aa5.16□□□□□ -1.58
PRPF39-212ENST00000557477 C9orf84Q5VXU9 1444 aa5.15□□□□□ -1.58
PRPF39-212ENST00000557477 RICTORQ6R327 1708 aa5.15□□□□□ -1.58
PRPF39-212ENST00000557477 TCRBV5S1A1TA0A578 114 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 C3orf70A6NLC5 250 aaPredicted RBP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 C16orf96A6NNT2 1141 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 SEPT4O43236 478 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 KLK10O43240 276 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 EPB41L2O43491 1005 aaKnown RBP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 GCP02774 474 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 HNRNPA1P09651 372 aaKnown RBP eCLIP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 ATP1A3P13637 1013 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 TNFAIP3P21580 790 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 PROZP22891 400 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 PNPLA4P41247 253 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 SLC37A1P57057 533 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 ZXDAP98168 799 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 MAPK7Q13164 816 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 LARS2Q15031 903 aaKnown RBP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 CNGA3Q16281 694 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 RETSATQ6NUM9 610 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 CEP85Q6P2H3 762 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 TMEM65Q6PI78 240 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 LDLRAD3Q86YD5 345 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 STAMQ92783 540 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 HVCN1Q96D96 273 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 GPR78Q96P69 363 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 PRRX2Q99811 253 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 RNF26Q9BY78 433 aaPredicted RBP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 CPNE5Q9HCH3 593 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 TLR8Q9NR97 1041 aaKnown RBP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 GAR1Q9NY12 217 aaKnown RBP5.15□□□□□ -1.59
PRPF39-212ENST00000557477 TFCP2L1Q9NZI6 479 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 SH3BP4Q9P0V3 963 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 SERGEFQ9UGK8 458 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 SLC13A4Q9UKG4 626 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 TTC37Q6PGP7 1564 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 HECW1Q76N89 1606 aa5.15□□□□□ -1.59
PRPF39-212ENST00000557477 NUP153P49790 1475 aaKnown RBP5.14□□□□□ -1.59
PRPF39-212ENST00000557477 ARHGAP5Q13017 1502 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 ZMYM4Q5VZL5 1548 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 H3BNC9 293 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 RHOBTB3O94955 611 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 FSHBP01225 129 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 SLC3A2P08195 630 aaKnown RBP5.14□□□□□ -1.59
PRPF39-212ENST00000557477 SFPQP23246 707 aaKnown RBP eCLIP5.14□□□□□ -1.59
PRPF39-212ENST00000557477 PCP4P48539 62 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 VPS41P49754 854 aa5.14□□□□□ -1.59
PRPF39-212ENST00000557477 CACNA2D1P54289 1103 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms