RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PPP2CAP67775 309 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 AMPD3Q01432 767 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 MPP7Q5T2T1 576 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 RSRC2Q7L4I2 434 aaKnown RBP13.05□□□□□ -0.32
PSEN1-221ENST00000557293 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
PSEN1-221ENST00000557293 MFSD2AQ8NA29 543 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 SLC4A11Q8NBS3 891 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 TAS1R2Q8TE23 839 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 DHX58Q96C10 678 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 ULBP1Q9BZM6 244 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 KCTD10Q9H3F6 313 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 ASCL3Q9NQ33 180 aa13.05□□□□□ -0.32
PSEN1-221ENST00000557293 DOCK9Q9BZ29 2069 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 PVALEFA0A1B0GWK0 134 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 A0A1W2PNU3 283 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-221ENST00000557293 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 KLRC4O43908 158 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 OPA1O60313 960 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 TBL1XO60907 577 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 GABBR2O75899 941 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 LATS1O95835 1130 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 ZBED1O96006 694 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 SLFN14P0C7P3 912 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 GOT1P17174 413 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 CD58P19256 250 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 CSKP41240 450 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 CTSOP43234 321 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-221ENST00000557293 LSSP48449 732 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
PSEN1-221ENST00000557293 TKTL1P51854 596 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 UCNP55089 124 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 ZNF445P59923 1031 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 PPP3CAQ08209 521 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 VAC14Q08AM6 782 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 STK4Q13043 487 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 ZNF211Q13398 564 aaPredicted RBP13.04□□□□□ -0.32
PSEN1-221ENST00000557293 CUL4AQ13619 759 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 ZNF394Q53GI3 561 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 FAM133BQ5BKY9 247 aaKnown RBP13.04□□□□□ -0.32
PSEN1-221ENST00000557293 ARHGAP17Q68EM7 881 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 SHC4Q6S5L8 630 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 FIBINQ8TAL6 211 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 FAM131CQ96AQ9 280 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 MED8Q96G25 268 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 HEXIM2Q96MH2 286 aaKnown RBP13.04□□□□□ -0.32
PSEN1-221ENST00000557293 OMDQ99983 421 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 SLCO3A1Q9UIG8 710 aa13.04□□□□□ -0.32
PSEN1-221ENST00000557293 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 TARSL2A2RTX5 802 aaKnown RBP13.03□□□□□ -0.32
PSEN1-221ENST00000557293 YJEFN3A6XGL0 299 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 E7ENQ6 273 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 MSI1O43347 362 aaKnown RBP13.03□□□□□ -0.32
PSEN1-221ENST00000557293 SDC3O75056 442 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 IGLV3-27P01718 113 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 SYT1P21579 422 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 DRD3P35462 400 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 PIK3CAP42336 1068 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 METAP1P53582 386 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 RAD23BP54727 409 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 ADPRHP54922 357 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 ERVPABLB-1P60509 514 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 SKOR1P84550 965 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 CUL4BQ13620 913 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 FSCBQ5H9T9 825 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 BROXQ5VW32 411 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 NADSYN1Q6IA69 706 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 NAPEPLDQ6IQ20 393 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 STK40Q8N2I9 435 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 OXR1Q8N573 874 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 ANKRD52Q8NB46 1076 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 OR14C36Q8NHC7 312 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 EDEM1Q92611 657 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 OLA1Q9NTK5 396 aaKnown RBP13.03□□□□□ -0.32
PSEN1-221ENST00000557293 UCKL1Q9NWZ5 548 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 U3KQA8 63 aa13.03□□□□□ -0.32
PSEN1-221ENST00000557293 KLK10O43240 276 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 SLC28A2O43868 658 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
PSEN1-221ENST00000557293 USP12O75317 370 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 ASLP04424 464 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 MCCD1P59942 119 aaPredicted RBP13.02□□□□□ -0.33
PSEN1-221ENST00000557293 GABREP78334 506 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
PSEN1-221ENST00000557293 MMS22LQ6ZRQ5 1243 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 SND1Q7KZF4 910 aaKnown RBP eCLIP13.02□□□□□ -0.33
PSEN1-221ENST00000557293 IQCHQ86VS3 1027 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 LSMEM2Q8N112 164 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 EXD3Q8N9H8 876 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
PSEN1-221ENST00000557293 KCNE4Q8WWG9 221 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms