RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ALG13Q9NP73 1137 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CROTQ9UKG9 612 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 LSM1O15116 133 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CYP1A1P04798 512 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 HOXC6P09630 235 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 GYS2P54840 703 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 WDR72Q3MJ13 1102 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PDPK2PQ6A1A2 396 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 CLEC4GQ6UXB4 293 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ANKMY2Q8IV38 441 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 TEFMQ96QE5 360 aaKnown RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 SENP6Q9GZR1 1112 aaPredicted RBP9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ANKZF1Q9H8Y5 726 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 ATXN10Q9UBB4 475 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 MORF4L1Q9UBU8 362 aa9.01□□□□□ -0.97
SYNE3-205ENST00000557275 PLA2G6O60733 806 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 METTL18O95568 372 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 PEPDP12955 493 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 NMT1P30419 496 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 TLX1P31314 330 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 HDDC3Q8N4P3 179 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 LRRC1Q9BTT6 524 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF12P17014 697 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ARF3P61204 181 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 ARF1P84077 181 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PTF1AQ7RTS3 328 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 RAB43Q86YS6 212 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF594Q96JF6 807 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PPIBP23284 216 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 ATP5F1P24539 256 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 CD302Q8IX05 232 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 GPRASP2Q96D09 838 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 REXO5Q96IC2 774 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 TBC1D13Q9NVG8 400 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 DNAJC13O75165 2243 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ACSL4O60488 711 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 CCNE2O96020 404 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 BMP7P18075 431 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 TMPRSS11AQ6ZMR5 421 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 FAM20CQ8IXL6 584 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 SYNDIG1Q9H7V2 258 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 SERPINE1P05121 402 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 PSMA1P25786 263 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 ADORA2BP29275 332 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 VMACQ2NL98 169 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 B3GALNT2Q8NCR0 500 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 CCDC107Q8WV48 283 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 DNAJC1Q96KC8 554 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PANX3Q96QZ0 392 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 NMRK2Q9NPI5 230 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 SNX8Q9Y5X2 465 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 PTPRZ1P23471 2315 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 ADAM32Q8TC27 787 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 SPPL2AQ8TCT8 520 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF398Q8TD17 642 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 DPY30Q9C005 99 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 FAM172BPA6NC97 362 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 DHX15O43143 795 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF3P17036 446 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ADD2P35612 726 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 GSSP48637 474 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 FMO5P49326 533 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 IER5Q5VY09 327 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 CPNE2Q96FN4 548 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 FAM49AQ9H0Q0 323 aaPredicted RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 NMRAL1Q9HBL8 299 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 MRTO4Q9UKD2 239 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF432O94892 652 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 AQP5P55064 265 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 POC5Q8NA72 575 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 NACC2Q96BF6 587 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 CPNE1Q99829 537 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM8AQ9HCN3 771 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 FBXO21O94952 628 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 NTSP30990 170 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 MCL1Q07820 350 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 MROH9Q5TGP6 573 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ATG14Q6ZNE5 492 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 OR56A4Q8NGH8 313 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 VCPIP1Q96JH7 1222 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 CCDC86Q9H6F5 360 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 STAU2Q9NUL3 570 aaKnown RBP eCLIP9□□□□□ -0.97
SYNE3-205ENST00000557275 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 DGKIO75912 1065 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 GLP2RO95838 553 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 IFNA16P05015 189 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 PCNAP12004 261 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 GPD1P21695 349 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 RFC5P40937 340 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 CMTR1Q8N1G2 835 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PTCD2Q8WV60 388 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 QSOX1O00391 747 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 PRRG1O14668 218 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 RAD17O75943 681 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 LSM8O95777 96 aaKnown RBP9□□□□□ -0.97
SYNE3-205ENST00000557275 PET100P0DJ07 73 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ITGA8P53708 1063 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 RALGDSQ12967 914 aa9□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF211Q13398 564 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms