RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 NUMBP49757 651 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 KDSRQ06136 332 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 MLF2Q15773 248 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 ALFQ53S48 1182 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 TTC39BQ5VTQ0 682 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 POLNQ7Z5Q5 900 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 ZNF683Q8IZ20 524 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 SIX5Q8N196 739 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 KRT35Q92764 455 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 CHFRQ96EP1 664 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 C8orf33Q9H7E9 229 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 CLEC4EQ9ULY5 219 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 DOCK8Q8NF50 2099 aa14.48□□□□□ -0.09
VIPAS39-208ENST00000556412 H3BRJ5 948 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 TRIM24O15164 1050 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 PSTPIP1O43586 416 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 TULP3O75386 442 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 CD48P09326 243 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 CD72P21854 359 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 ZXDAP98168 799 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 MPP7Q5T2T1 576 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 LRRC38Q5VT99 294 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 RFX8Q6ZV50 586 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 NT5DC3Q86UY8 548 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 TRIM58Q8NG06 486 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 RAPGEF5Q92565 580 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 RNF25Q96BH1 459 aaPredicted RBP14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 PCDH18Q9HCL0 1135 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 DDX56Q9NY93 547 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 DEC1Q9P2X7 70 aa14.47□□□□□ -0.09
VIPAS39-208ENST00000556412 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 A0A1B0GVM2 712 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 GOLGA6L9A6NEM1 432 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 TCAF2A6NFQ2 919 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 DRGXA6NNA5 263 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 STK25O00506 426 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 DCXO43602 365 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 KIF5CO60282 957 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 CACNG3O60359 315 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 LUC7L3O95232 432 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 DGKGP49619 791 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 CDH4P55283 916 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 NRG1Q02297 640 aaPredicted RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 MMRN1Q13201 1228 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 SEMA3BQ13214 749 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 ZNF177Q13360 481 aaPredicted RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 GAB4Q2WGN9 574 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 MANEALQ5VSG8 457 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 GRAMD4Q6IC98 578 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 TXNDC11Q6PKC3 985 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 RALGPS2Q86X27 583 aaPredicted RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 CCDC50Q8IVM0 306 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 MAP7D3Q8IWC1 876 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 WFDC5Q8TCV5 224 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 FAM3CQ92520 227 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 P2RY13Q9BPV8 354 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 CWC15Q9P013 229 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 PPARGC1AQ9UBK2 798 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 WNT16Q9UBV4 365 aa14.46□□□□□ -0.09
VIPAS39-208ENST00000556412 DENND4CQ5VZ89 1909 aa14.46□□□□□ -0.1
VIPAS39-208ENST00000556412 IGLV3-10A0A075B6K4 115 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CCDC66A2RUB6 948 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CLDN11O75508 207 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 OR1E1P30953 314 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CTNNA1P35221 906 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 OPRD1P41143 372 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 PON2Q15165 354 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 LLGL1Q15334 1064 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF569Q5MCW4 686 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 ETFBKMTQ8IXQ9 262 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 UBL4BQ8N7F7 174 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CD101Q93033 1021 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CSPG4P5Q96PW8 444 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CATSPERBQ9H7T0 1116 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 ARHGEF4Q9NR80 690 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 ABCB8Q9NUT2 735 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 DNAI1Q9UI46 699 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 NDRG2Q9UN36 371 aaKnown RBP14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 KRBA1A5PL33 1030 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 RHOQP17081 205 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 KDELR1P24390 212 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 GALK1P51570 392 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 DPYSL3Q14195 570 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 PDK2Q15119 407 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 C5orf22Q49AR2 442 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 HS1BP3Q53T59 392 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 FSCBQ5H9T9 825 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 ZNF852Q6ZMS4 543 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 CHST9Q7L1S5 443 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 PNKPQ96T60 521 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 NEU3Q9UQ49 428 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 PCDHA3Q9Y5H8 950 aa14.45□□□□□ -0.1
VIPAS39-208ENST00000556412 HELZP42694 1942 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 TCF20Q9UGU0 1960 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 TBC1D3BA6NDS4 549 aa14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 MIF4GDA9UHW6 222 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 FGF10O15520 208 aaPredicted RBP14.44□□□□□ -0.1
VIPAS39-208ENST00000556412 ZRANB2O95218 330 aaKnown RBP eCLIP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms