RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 RAB23Q9ULC3 237 aa15.7■□□□□ 0.1
ACTN1-217ENST00000556203 VANGL2Q9ULK5 521 aa15.7■□□□□ 0.1
ACTN1-217ENST00000556203 CAPN11Q9UMQ6 739 aa15.7■□□□□ 0.1
ACTN1-217ENST00000556203 TCRBV5S1A1TA0A578 114 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 NPC1O15118 1278 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 GYPCP04921 128 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 RRM1P23921 792 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 RFC1P35251 1148 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 E2F5Q15329 346 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 CDO1Q16878 200 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 RAB6CQ53S08 254 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 TDRD12Q587J7 1177 aaKnown RBP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 FSCBQ5H9T9 825 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 TTC39BQ5VTQ0 682 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 PPP1R2P3Q6NXS1 205 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 C14orf80Q86SX3 495 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 FAM131BQ86XD5 332 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 PGBD3Q8N328 593 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 SYN2Q92777 582 aaPredicted RBP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 IGSF8Q969P0 613 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 HINFPQ9BQA5 517 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 RAB6CQ9H0N0 254 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 TMPRSS4Q9NRS4 437 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 LUC7L2Q9Y383 392 aaKnown RBP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.1
ACTN1-217ENST00000556203 SNX10Q9Y5X0 201 aa15.69■□□□□ 0.1
ACTN1-217ENST00000556203 SIGLEC16A6NMB1 481 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 DCLK1O15075 740 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 ZBTB24O43167 697 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 ENDOD1O94919 500 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 POLR2EP19388 210 aaKnown RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 GPD1P21695 349 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 PRKCHP24723 683 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 PTPN9P43378 593 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 IRAK1P51617 712 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 ENPP2Q13822 863 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 FNDC3BQ53EP0 1204 aaKnown RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 USP39Q53GS9 565 aaKnown RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 SH3PXD2AQ5TCZ1 1133 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 WDR59Q6PJI9 974 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 SERPINA13PQ6UXR4 307 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 DNAAF5Q86Y56 855 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 CCAR2Q8N163 923 aaKnown RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 MCEEQ96PE7 176 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 CD248Q9HCU0 757 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 KIAA1522Q9P206 1035 aaPredicted RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 INTS6Q9UL03 887 aaKnown RBP15.68■□□□□ 0.1
ACTN1-217ENST00000556203 PLA2G4CQ9UP65 541 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 INVSQ9Y283 1065 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 MYO15AQ9UKN7 3530 aa15.68■□□□□ 0.1
ACTN1-217ENST00000556203 A0A1B0GVM2 712 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 TCAF2A6NFQ2 919 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 SYNCRIPO60506 623 aaKnown RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 FTLP02792 175 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 ATP5BP06576 529 aaKnown RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 DLDP09622 509 aaKnown RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 GZMAP12544 262 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 GABRG2P18507 467 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 CASP14P31944 242 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 CSKP41240 450 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 RPL7AP62424 266 aaKnown RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 STARD3Q14849 445 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 PTPRNQ16849 979 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 PITRM1Q5JRX3 1037 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 PPP1R15BQ5SWA1 713 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 HGSNATQ68CP4 663 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 SPECC1LQ69YQ0 1117 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 DCUN1D2Q6PH85 259 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 STRADAQ7RTN6 431 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 FAM172AQ8WUF8 416 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 RLN3Q8WXF3 142 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 RUBCNQ92622 972 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 VCPIP1Q96JH7 1222 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 C1orf74Q96LT6 269 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 HAPLN3Q96S86 360 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 NCDNQ9UBB6 729 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 GMEB2Q9UKD1 530 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 BZW2Q9Y6E2 419 aaKnown RBP15.67■□□□□ 0.1
ACTN1-217ENST00000556203 FANCMQ8IYD8 2048 aa15.67■□□□□ 0.1
ACTN1-217ENST00000556203 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 ANKRD62A6NC57 917 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 ATMINO43313 823 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 MOCS3O95396 460 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 SERPING1P05155 500 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 EPHX1P07099 455 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 PLEKP08567 350 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 HLA-EP13747 358 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 NDUFV2P19404 249 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 ZNF143P52747 638 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 HDAC4P56524 1084 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 ZNF177Q13360 481 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 MAMLD1Q13495 774 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 C5orf22Q49AR2 442 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 ACBD5Q5T8D3 534 aaPredicted RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 LAIR1Q6GTX8 287 aa15.66■□□□□ 0.1
ACTN1-217ENST00000556203 CXorf57Q6NSI4 855 aaKnown RBP15.66■□□□□ 0.1
ACTN1-217ENST00000556203 LRRC31Q6UY01 552 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms