RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ARPP21Q9UBL0 812 aaPredicted RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 ZBTB1Q9Y2K1 713 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 INSL6Q9Y581 213 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 SPATA31A1Q5TZJ5 1347 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 RPRD2Q5VT52 1461 aaKnown RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 SYCP2Q9BX26 1530 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 TULP4Q9NRJ4 1543 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 ERVK-7P63135 1459 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 WDR33Q9C0J8 1336 aaKnown RBP3.82□□□□□ -1.8
SRP54-209ENST00000555746 CCDC187A0A096LP49 1063 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 SLC38A8A6NNN8 435 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 BTBD19C9JJ37 291 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 NKX2-8O15522 239 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 IRAK2O43187 625 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 PRAMEF2O60811 474 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 PROP1O75360 226 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 C1QL1O75973 258 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 MT-CO3P00414 261 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 ALADP13716 330 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 ATF7P17544 494 aaPredicted RBP3.82□□□□□ -1.8
SRP54-209ENST00000555746 ADD2P35612 726 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 TGFB2P61812 414 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 HOXA4Q00056 320 aaPredicted RBP3.82□□□□□ -1.8
SRP54-209ENST00000555746 SF3A3Q12874 501 aaKnown RBP eCLIP3.82□□□□□ -1.8
SRP54-209ENST00000555746 BFSP2Q13515 415 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 AAK1Q2M2I8 961 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 P3H1Q32P28 736 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 C16orf89Q6UX73 402 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 NAPRTQ6XQN6 538 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 TRIM72Q6ZMU5 477 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 MOGAT3Q86VF5 341 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 SMAP1Q8IYB5 467 aaPredicted RBP3.82□□□□□ -1.8
SRP54-209ENST00000555746 CPXCR1Q8N123 301 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 FAM71DQ8N9W8 422 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 OR6Y1Q8NGX8 325 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 NPIPB3Q92617 1050 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 CHFRQ96EP1 664 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 DAZAP1Q96EP5 407 aaKnown RBP3.82□□□□□ -1.8
SRP54-209ENST00000555746 MCRS1Q96EZ8 462 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 FAR2Q96K12 515 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 MMS19Q96T76 1030 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 MACROD1Q9BQ69 325 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 RNF26Q9BY78 433 aaPredicted RBP3.82□□□□□ -1.8
SRP54-209ENST00000555746 TWSG1Q9GZX9 223 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 IKZF4Q9H2S9 585 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 CDCP1Q9H5V8 836 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 ITM2CQ9NQX7 267 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 ABHD10Q9NUJ1 306 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 TFCP2L1Q9NZI6 479 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 KIF17Q9P2E2 1029 aa3.82□□□□□ -1.8
SRP54-209ENST00000555746 COL24A1Q17RW2 1714 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 ABCA3Q99758 1704 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 ADAMTS7Q9UKP4 1686 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 INO80Q9ULG1 1556 aaPredicted RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 CACNA1GO43497 2377 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 TCRBV5S1A1TA0A578 114 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 TARM1B6A8C7 271 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 H0Y3Z8 333 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 AKAP8O43823 692 aaKnown RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 PPP6R2O75170 966 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 GPD1P21695 349 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 GALNSP34059 522 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 PPM1FP49593 454 aaPredicted RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 MCM2P49736 904 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 RAE1P78406 368 aaKnown RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 TIGD6Q17RP2 521 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 TBRG1Q3YBR2 411 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 FBXO47Q5MNV8 452 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 ANKRD18AQ8IVF6 992 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 SUGP1Q8IWZ8 645 aaKnown RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 MAFAQ8NHW3 353 aaPredicted RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 CPT1BQ92523 772 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 TRIM63Q969Q1 353 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 REXO5Q96IC2 774 aaKnown RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 SORCS2Q96PQ0 1159 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 TRAPPC9Q96Q05 1148 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 FAM167BQ9BTA0 163 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 MECRQ9BV79 373 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 ABHD16BQ9H3Z7 469 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 PRDM13Q9H4Q3 707 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 ELAC1Q9H777 363 aaKnown RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 USP29Q9HBJ7 922 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 CPNE5Q9HCH3 593 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 G6PC2Q9NQR9 355 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 IL17RBQ9NRM6 502 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 LIN7CQ9NUP9 197 aaKnown RBP3.81□□□□□ -1.8
SRP54-209ENST00000555746 ASB6Q9NWX5 421 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 NDUFAF4Q9P032 175 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 SERGEFQ9UGK8 458 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 PCDHB7Q9Y5E2 793 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 WNT6Q9Y6F9 365 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 THSD7AQ9UPZ6 1657 aa3.81□□□□□ -1.8
SRP54-209ENST00000555746 ADGRB3O60242 1522 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 COL6A3P12111 3177 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 SZT2Q5T011 3432 aa3.8□□□□□ -1.8
SRP54-209ENST00000555746 A0A0U1RQG5 324 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms