RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 F5H5T6 163 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 ALDH1A2O94788 518 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 RETP07949 1114 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 SLC2A3P11169 496 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 CSKP41240 450 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 CTSOP43234 321 aaPredicted RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 ATP11AP98196 1134 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 DEUP1Q05D60 604 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 EIF4HQ15056 248 aaKnown RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 NFKBIBQ15653 356 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 C15orf59Q2T9L4 293 aaPredicted RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 CCDC14Q49A88 953 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 USP39Q53GS9 565 aaKnown RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 SDE2Q6IQ49 451 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 CXorf57Q6NSI4 855 aaKnown RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 ZNF571Q7Z3V5 609 aaPredicted RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 ZNF683Q8IZ20 524 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 AHI1Q8N157 1196 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 PGBD3Q8N328 593 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 WFIKKN2Q8TEU8 576 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 RXFP2Q8WXD0 754 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 MYO19Q96H55 970 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 ZC3H10Q96K80 434 aaKnown RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 MRGPRX1Q96LB2 322 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 MAGEB5Q9BZ81 275 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 MKRN2Q9H000 416 aaKnown RBP14.13□□□□□ -0.15
SNX6-203ENST00000555416 TKTL2Q9H0I9 626 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 SIK2Q9H0K1 926 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 TMEM245Q9H330 911 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 SMOC1Q9H4F8 434 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 ADAM22Q9P0K1 906 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 VANGL2Q9ULK5 521 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 MYO6Q9UM54 1294 aa14.13□□□□□ -0.15
SNX6-203ENST00000555416 CKAP5Q14008 2032 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 SPTBN4Q9H254 2564 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 C2CD4BA6NLJ0 364 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 TIMM44O43615 452 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 CNTN5O94779 1100 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 SKILP12757 684 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 MZF1P28698 734 aaPredicted RBP14.12□□□□□ -0.15
SNX6-203ENST00000555416 RFC1P35251 1148 aaPredicted RBP14.12□□□□□ -0.15
SNX6-203ENST00000555416 NSFP46459 744 aaKnown RBP14.12□□□□□ -0.15
SNX6-203ENST00000555416 COPAP53621 1224 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 UBASH3AP57075 661 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 CDH18Q13634 790 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 PITRM1Q5JRX3 1037 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 ARCQ7LC44 396 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 FAM131BQ86XD5 332 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 CCAR2Q8N163 923 aaKnown RBP14.12□□□□□ -0.15
SNX6-203ENST00000555416 MSANTD4Q8NCY6 345 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 UCMAQ8WVF2 138 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 TTC17Q96AE7 1141 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 MRGPRX3Q96LB0 322 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 ARRDC1-AS1Q9H2J1 176 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 HAUS4Q9H6D7 363 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 WDCPQ9H6R7 721 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 RRN3Q9NYV6 651 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 AIPL1Q9NZN9 384 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 IFNKQ9P0W0 207 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 SLC12A6Q9UHW9 1150 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 GMEB2Q9UKD1 530 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 STAP1Q9ULZ2 295 aa14.12□□□□□ -0.15
SNX6-203ENST00000555416 DCHS1Q96JQ0 3298 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 TMCO5BA8MYB1 307 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 H0Y626 953 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 GOLGA6L19H0YKK7 550 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 DDX3XO00571 662 aaKnown RBP eCLIP14.11□□□□□ -0.156e-10■■■■■ 32.8
SNX6-203ENST00000555416 ENDOD1O94919 500 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 DLDP09622 509 aaKnown RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 PDGFRAP16234 1089 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 POLR2EP19388 210 aaKnown RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 GSCP56915 257 aaPredicted RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 ASIC2Q16515 512 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 CDO1Q16878 200 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 C5orf22Q49AR2 442 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 FNDC3BQ53EP0 1204 aaKnown RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 ALFQ53S48 1182 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 BRMS1LQ5PSV4 323 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 SFMBT2Q5VUG0 894 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 PMS2CLQ68D20 193 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 ACAD10Q6JQN1 1059 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 WDR59Q6PJI9 974 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 KIAA1324Q6UXG2 1013 aaKnown RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 SERPINA13PQ6UXR4 307 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 CACUL1Q86Y37 369 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 MCOLN2Q8IZK6 566 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 ALG14Q96F25 216 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 RPRD1AQ96P16 312 aaPredicted RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.11□□□□□ -0.15
SNX6-203ENST00000555416 CEP250Q9BV73 2442 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 THADAQ6YHU6 1953 aa14.11□□□□□ -0.15
SNX6-203ENST00000555416 PLXND1Q9Y4D7 1925 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 IGHV1OR15-9A0A0B4J2B8 117 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 A0A1B0GVM2 712 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 TYW5A2RUC4 315 aaKnown RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 TCAF2A6NFQ2 919 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 NPC1O15118 1278 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 EPN2O95208 641 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms