RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ARPP21	Q9UBL0	812 aa	Predicted RBP	6	□□□□□ -1.45
PSMC6-208	ENST00000554956	SLC45A1	Q9Y2W3	748 aa		6	□□□□□ -1.45
PSMC6-208	ENST00000554956	COX11	Q9Y6N1	276 aa		6	□□□□□ -1.45
PSMC6-208	ENST00000554956	RANBP2	P49792	3224 aa	Known RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	GOLIM4	O00461	696 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	TLR5	O60602	858 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	NXPH3	O95157	252 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	VNN1	O95497	513 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	MYF5	P13349	255 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	ZKSCAN1	P17029	563 aa	Predicted RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	DRD4	P21917	467 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	CCT8	P50990	548 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	DGKE	P52429	567 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	RPS16	P62249	146 aa	Known RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	DYNLL1	P63167	89 aa	Known RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	FMO1	Q01740	532 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	BIRC2	Q13490	618 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	POLD3	Q15054	466 aa	Predicted RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	FAM110C	Q1W6H9	321 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	MGAT5B	Q3V5L5	792 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	TEDDM1	Q5T9Z0	273 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	ATF7IP	Q6VMQ6	1270 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	ZNF551	Q7Z340	670 aa	Predicted RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	SLC15A3	Q8IY34	581 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	TEX11	Q8IYF3	940 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	FRAT1	Q92837	279 aa	Predicted RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	RPS6KC1	Q96S38	1066 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	TIMP4	Q99727	224 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	APOL5	Q9BWW9	433 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	GLOD4	Q9HC38	313 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	PIH1D3	Q9NQM4	214 aa	Known RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	SERTAD4	Q9NUC0	356 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	RAI14	Q9P0K7	980 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	PTGFRN	Q9P2B2	879 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	AFF4	Q9UHB7	1163 aa	Known RBP	5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	SNX14	Q9Y5W7	946 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	SZT2	Q5T011	3432 aa		5.99	□□□□□ -1.45
PSMC6-208	ENST00000554956	RBBP6	Q7Z6E9	1792 aa	Known RBP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	CEP290	O15078	2479 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956		A1L4Q6	167 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	ISM1	B1AKI9	464 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	TFRC	P02786	760 aa	Known RBP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	XRCC6	P12956	609 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	GPD1	P21695	349 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	PDE6C	P51160	858 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	ATXN1	P54253	815 aa	Known RBP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	PRKAG1	P54619	331 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	ELL	P55199	621 aa	Predicted RBP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	PROK1	P58294	105 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	UBXN2A	P68543	259 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	FAM193A	P78312	1265 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	LY6K	Q17RY6	165 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	PTCHD3	Q3KNS1	767 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	PLAC9	Q5JTB6	97 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	DPY19L2P1	Q6NXN4	242 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	SESTD1	Q86VW0	696 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	TRIB2	Q92519	343 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	SARAF	Q96BY9	339 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	APIP	Q96GX9	242 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	LRRC27	Q9C0I9	530 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	PORCN	Q9H237	461 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	A1CF	Q9NQ94	594 aa	Known RBP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	COL20A1	Q9P218	1284 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	DBNL	Q9UJU6	430 aa	Known RBP	5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	OGDHL	Q9ULD0	1010 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956	FLT1	P17948	1338 aa		5.98	□□□□□ -1.45
PSMC6-208	ENST00000554956		H0YIZ8	118 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956		H7C4K7	107 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	PYCARD-AS1	I3L0S3	204 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	MGEA5	O60502	916 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	CNMD	O75829	334 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	LDHC	P07864	332 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	NDUFB7	P17568	137 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	CYP2B6	P20813	491 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	BACE1	P56817	501 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	GSTO1	P78417	241 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	SATB1	Q01826	763 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	SEMA5A	Q13591	1074 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	CCL14	Q16627	93 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	FAM153C	Q494X1	144 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	SLC44A4	Q53GD3	710 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	MAP3K21	Q5TCX8	1036 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	NAA16	Q6N069	864 aa	Predicted RBP	5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	KCTD20	Q7Z5Y7	419 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	ZNF575	Q86XF7	245 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	MIGA1	Q8NAN2	632 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	OSCP1	Q8WVF1	389 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	USP6NL	Q92738	828 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	PPP2R3C	Q969Q6	453 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	SPSB4	Q96A44	273 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	NMD3	Q96D46	503 aa	Known RBP	5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	ZNF287	Q9HBT7	754 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	DLL3	Q9NYJ7	618 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	PI4KB	Q9UBF8	816 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	MORF4L1	Q9UBU8	362 aa		5.97	□□□□□ -1.45
PSMC6-208	ENST00000554956	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms