RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 MTG2Q9H4K7 406 aa12.3□□□□□ -0.44
PSMC6-207ENST00000554952 SLC32A1Q9H598 525 aa12.3□□□□□ -0.44
PSMC6-207ENST00000554952 PRSS16Q9NQE7 514 aa12.3□□□□□ -0.44
PSMC6-207ENST00000554952 TJP2Q9UDY2 1190 aa12.3□□□□□ -0.44
PSMC6-207ENST00000554952 SLC12A6Q9UHW9 1150 aa12.3□□□□□ -0.44
PSMC6-207ENST00000554952 XPO7Q9UIA9 1087 aaKnown RBP12.3□□□□□ -0.44
PSMC6-207ENST00000554952 SYNJ2BP-COX16A0A087WUM0 186 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 H0Y626 953 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 GRAP2O75791 330 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 IGLV3-19P01714 112 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 PRKCSHP14314 528 aaPredicted RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 ERCC5P28715 1186 aaPredicted RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 KRT9P35527 623 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 CSKP41240 450 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 ST8SIA6P61647 398 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 RPS14P62263 151 aaKnown RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 PITX1P78337 314 aaPredicted RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 CDK17Q00537 523 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 FOXC1Q12948 553 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 SEMA3BQ13214 749 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 CDH18Q13634 790 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 MAN2A1Q16706 1144 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 FSCBQ5H9T9 825 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 EFHC1Q5JVL4 640 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 RAP1GAP2Q684P5 730 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 OR6B2Q6IFH4 312 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 DEFB106AQ8N104 65 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 DNASE2BQ8WZ79 361 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 TTC17Q96AE7 1141 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 LMLNQ96KR4 655 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 BTN2A3PQ96KV6 586 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 PRICKLE1Q96MT3 831 aaPredicted RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 NOX5Q96PH1 765 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 CPXM1Q96SM3 734 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 SYNCQ9H7C4 482 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 FAM204AQ9H8W3 233 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 SIX2Q9NPC8 291 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 COX16Q9P0S2 106 aa12.29□□□□□ -0.44
PSMC6-207ENST00000554952 EIF2B4Q9UI10 523 aaKnown RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
PSMC6-207ENST00000554952 A0A1B0GTW7 788 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 SPAARA0A1B0GVQ0 90 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 KCNU1A8MYU2 1149 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 PES1O00541 588 aaKnown RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 MOCS3O95396 460 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 DNTTP04053 509 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 PNMA6AP0CW24 399 aaPredicted RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 SLC2A3P11169 496 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 ABCB4P21439 1286 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 TACR2P21452 398 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 ACSL1P33121 698 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 CLCN1P35523 988 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 SNX16P57768 344 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 SHC2P98077 582 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 VWA3BQ502W6 1294 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 PITRM1Q5JRX3 1037 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 C11orf57Q6ZUT1 292 aaPredicted RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 SLC47A2Q86VL8 602 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 ZCCHC9Q8N567 271 aaKnown RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 ATP6V0D2Q8N8Y2 350 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 GANCQ8TET4 914 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 SNX19Q92543 992 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 NUP62CLQ9H1M0 184 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 PDCL3Q9H2J4 239 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 FBRSQ9HAH7 460 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 DDIT4Q9NX09 232 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 DACH1Q9UI36 760 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
PSMC6-207ENST00000554952 PCDHGC3Q9UN70 934 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 NFE2L3Q9Y4A8 694 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 CEP83Q9Y592 693 aa12.28□□□□□ -0.44
PSMC6-207ENST00000554952 F5H5T6 163 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 BCAT2O15382 392 aaPredicted RBP12.27□□□□□ -0.45
PSMC6-207ENST00000554952 HSF2BPO75031 334 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 IGLV3-25P01717 112 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 ASLP04424 464 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 GLI1P08151 1106 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 CCR1P32246 355 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 CTSOP43234 321 aaPredicted RBP12.27□□□□□ -0.45
PSMC6-207ENST00000554952 BPIFB4P59827 614 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 SIM1P81133 766 aaPredicted RBP12.27□□□□□ -0.45
PSMC6-207ENST00000554952 SLC6A3Q01959 620 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 ZBTB16Q05516 673 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 NME3Q13232 169 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 RAPGEF1Q13905 1077 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 MIIPQ5JXC2 388 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 PIP4P1Q86T03 277 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.45
PSMC6-207ENST00000554952 FAM71AQ8IYT1 594 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 APCDD1Q8J025 514 aa12.27□□□□□ -0.45
PSMC6-207ENST00000554952 C1orf131Q8NDD1 294 aaKnown RBP12.27□□□□□ -0.45
PSMC6-207ENST00000554952 SLC2A13Q96QE2 648 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms