RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GPD1P21695 349 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 HOXD12P35452 270 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 GDF5P43026 501 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 ZNF84P51523 738 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 B4GALNT1Q00973 533 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 CTXN3Q4LDR2 81 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 CC2D1BQ5T0F9 858 aaKnown RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 UBAP2Q5T6F2 1119 aaKnown RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 SLC9C2Q5TAH2 1124 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 MAP3K21Q5TCX8 1036 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 SLC39A5Q6ZMH5 540 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 BBS12Q6ZW61 710 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 ADGRF3Q8IZF5 1079 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 PTGR2Q8N8N7 351 aaPredicted RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 PNLDC1Q8NA58 520 aaKnown RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 ADAMTS18Q8TE60 1221 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 PNISRQ8TF01 805 aaKnown RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 CELF1Q92879 486 aaKnown RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 RRP36Q96EU6 259 aaKnown RBP5.72□□□□□ -1.49
CHD8-207ENST00000554384 AGAP2Q99490 1192 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 GPR63Q9BZJ6 419 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 ACAD9Q9H845 621 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 PRDM16Q9HAZ2 1276 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 NOD2Q9HC29 1040 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 MLXIPLQ9NP71 852 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 HSF4Q9ULV5 492 aa5.72□□□□□ -1.49
CHD8-207ENST00000554384 FANCD2Q9BXW9 1451 aa5.71□□□□□ -1.49
CHD8-207ENST00000554384 NPIPB13A6NJU9 1138 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 NPIPB5A8MRT5 1133 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 NPIPB4C9JG80 1138 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 J3KRW8 73 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 SLC3A2P08195 630 aaKnown RBP5.71□□□□□ -1.5
CHD8-207ENST00000554384 HNRNPA1P09651 372 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD8-207ENST00000554384 ALDOCP09972 364 aaKnown RBP5.71□□□□□ -1.5
CHD8-207ENST00000554384 IGFBP2P18065 325 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 TNFAIP3P21580 790 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 PRPH2P23942 346 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 PCP4P48539 62 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 NR1H2P55055 460 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 TRPC3Q13507 836 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 ANKRD1Q15327 319 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 ATG16L1Q676U5 607 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 RANBP10Q6VN20 620 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 RNF144BQ7Z419 303 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 VPS52Q8N1B4 723 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 EXD3Q8N9H8 876 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 SRFBP1Q8NEF9 429 aaKnown RBP5.71□□□□□ -1.5
CHD8-207ENST00000554384 MPP4Q96JB8 637 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 GATA5Q9BWX5 397 aaPredicted RBP5.71□□□□□ -1.5
CHD8-207ENST00000554384 CTDSP1Q9GZU7 261 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 PCED1AQ9H1Q7 454 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 WASH6PQ9NQA3 447 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD8-207ENST00000554384 GAR1Q9NY12 217 aaKnown RBP5.71□□□□□ -1.5
CHD8-207ENST00000554384 ARPP21Q9UBL0 812 aaPredicted RBP5.71□□□□□ -1.5
CHD8-207ENST00000554384 HECW2Q9P2P5 1572 aa5.71□□□□□ -1.5
CHD8-207ENST00000554384 SMARCA4P51532 1647 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 URB2Q14146 1524 aaKnown RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 TTC34A8MYJ7 566 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 H7C1Q1 480 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 PEX12O00623 359 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 HNRNPRO43390 633 aaKnown RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 WT1P19544 449 aaPredicted RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 TFF2Q03403 129 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 TLE2Q04725 743 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 DPTQ07507 201 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 MAPK7Q13164 816 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 ERCC6LQ2NKX8 1250 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 CBWD5Q5RIA9 395 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 MTFR2Q6P444 385 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 RFX6Q8HWS3 928 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 AMER2Q8N7J2 671 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 ANKRD44Q8N8A2 993 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 SARAFQ96BY9 339 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 ZNF845Q96IR2 970 aaPredicted RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 PPM1MQ96MI6 270 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 SEC62Q99442 399 aaKnown RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 ABHD14AQ9BUJ0 271 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 PHF7Q9BWX1 381 aaPredicted RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 TM2D2Q9BX73 214 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 NUAK2Q9H093 628 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 STN1Q9H668 368 aaKnown RBP5.7□□□□□ -1.5
CHD8-207ENST00000554384 UBN1Q9NPG3 1134 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 SEMA4GQ9NTN9 838 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 THAP1Q9NVV9 213 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 PI4KBQ9UBF8 816 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 KLQ9UEF7 1012 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 FBXO4Q9UKT5 387 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 WNT6Q9Y6F9 365 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 AOX1Q06278 1338 aa5.7□□□□□ -1.5
CHD8-207ENST00000554384 ERCC6L2Q5T890 1561 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 CYR61O00622 381 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 DSCR3O14972 297 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 SEPT4O43236 478 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 DHX16O60231 1041 aaKnown RBP5.69□□□□□ -1.5
CHD8-207ENST00000554384 CNTN5O94779 1100 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 RHOBTB3O94955 611 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 ARSAP15289 507 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 CD72P21854 359 aa5.69□□□□□ -1.5
CHD8-207ENST00000554384 PNPLA4P41247 253 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms