RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PDS5BQ9NTI5 1447 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PDS5AQ29RF7 1337 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 POLR1CO15160 346 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 BUD23O43709 281 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NUDT7P0C024 238 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 HERVK_113P63132 956 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CYP4A11Q02928 519 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CYP4A22Q5TCH4 519 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PMF1Q6P1K2 205 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 KIAA0408Q6ZU52 694 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 DENND6AQ8IWF6 608 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF654Q8IZM8 581 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF668Q96K58 619 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 TNIP3Q96KP6 325 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 POP1Q99575 1024 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 AP4E1Q9UPM8 1137 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SRPRBQ9Y5M8 271 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 AATKQ6ZMQ8 1374 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 UTYO14607 1347 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 AOX1Q06278 1338 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 BCORL1Q5H9F3 1711 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CCDC78A2IDD5 438 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 KPNA3O00505 521 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RIPK2O43353 540 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SORBS3O60504 671 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ALBP02768 609 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NPR2P20594 1047 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 DDCP20711 480 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 HLA-FP30511 346 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC5A2P31639 672 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NAB1Q13506 487 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 GJB7Q6PEY0 223 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ZNF410Q86VK4 478 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RHPN2Q8IUC4 686 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 FOXRED2Q8IWF2 684 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RYBPQ8N488 228 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 ATG16L2Q8NAA4 619 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PIP5K1AQ99755 562 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 GTPBP2Q9BX10 602 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PNPLA3Q9NST1 481 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NDUFAF4Q9P032 175 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 COX16Q9P0S2 106 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 EIF2B4Q9UI10 523 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PCDHA12Q9UN75 941 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CFAP74Q9C0B2 1584 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 VILLO15195 856 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 PRPF3O43395 683 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CCNB1P14635 433 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 IL18R1Q13478 541 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SPANXN2Q5MJ10 180 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 DENND5AQ6IQ26 1287 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RWDD4Q6NW29 188 aaKnown RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 CLNKQ7Z7G1 428 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 RAB43Q86YS6 212 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 SDR42E1Q8WUS8 393 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NUAK2Q9H093 628 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 GPR108Q9NPR9 543 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 NAALADL1Q9UQQ1 740 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 UGGT2Q9NYU1 1516 aa9.19□□□□□ -0.94
GTF2A1-203ENST00000553612 WDR19Q8NEZ3 1342 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ECE2O60344 883 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 BRINP1O60477 761 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 MMP1P03956 469 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ARL4CP56559 192 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RPS7P62081 194 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 KCTD20Q7Z5Y7 419 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 PRAG1Q86YV5 1406 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 GPR156Q8NFN8 814 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 KCTD14Q9BQ13 255 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 STAP2Q9UGK3 403 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RIMKLBQ9ULI2 386 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 TCHHQ07283 1943 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 TO15178 435 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 SRCP12931 536 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 CDK16Q00536 496 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 AUHQ13825 339 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 TLR1Q15399 786 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 AASDHQ4L235 1098 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM160B1Q5W0V3 765 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ZCCHC23Q6ZST2 131 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 FAM160B2Q86V87 743 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 MREGQ8N565 214 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ZBTB44Q8NCP5 570 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RBM15BQ8NDT2 890 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 BSNDQ8WZ55 320 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 APOL2Q9BQE5 337 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ROPN1BQ9BZX4 212 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 INTS2Q9H0H0 1204 aaKnown RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 ROPN1Q9HAT0 212 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 NR2E3Q9Y5X4 410 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 YEATS2Q9ULM3 1422 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RGSL1A5PLK6 1076 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RFX1P22670 979 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 RPA3P35244 121 aaPredicted RBP9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 BNIP2Q12982 314 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 PLCL1Q15111 1095 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 COLEC12Q5KU26 742 aa9.18□□□□□ -0.94
GTF2A1-203ENST00000553612 DCP2Q8IU60 420 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms