RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PSMA4P25789 261 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 ITPKBP27987 946 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CXCR5P32302 372 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 GGT5P36269 586 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 FOLR3P41439 243 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 GPC5P78333 572 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 SETQ01105 290 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 NUCB1Q02818 461 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CDK18Q07002 472 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 ABHD17BQ5VST6 288 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 TMEM88Q6PEY1 159 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 WDR53Q7Z5U6 358 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 C12orf76Q8N812 135 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CACTINQ8WUQ7 758 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 ASB10Q8WXI3 467 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 EDC3Q96F86 508 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 LENG8Q96PV6 779 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 SNX18Q96RF0 628 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CD180Q99467 661 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 AIFM2Q9BRQ8 373 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CLPBQ9H078 707 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 INTS2Q9H0H0 1204 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 ARHGEF3Q9NR81 526 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 TLR8Q9NR97 1041 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 SLC22A11Q9NSA0 550 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 SERTAD4Q9NUC0 356 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 THAP1Q9NVV9 213 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 MTMR4Q9NYA4 1195 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 TESQ9UGI8 421 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 GAGE10A6NGK3 116 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 PRAMEF2O60811 474 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 PEX11BO96011 259 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 NR2F6P10588 404 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ITGAMP11215 1152 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 UBL4AP11441 157 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 EPHA8P29322 1005 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 GALNSP34059 522 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 STAT1P42224 750 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 JAK3P52333 1124 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 MVDP53602 400 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ARF3P61204 181 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 RAE1P78406 368 aaKnown RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ARF1P84077 181 aaKnown RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 PSG6Q00889 435 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ABHD18Q0P651 414 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 TUBA3CQ13748 450 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 EIF4A2Q14240 407 aaKnown RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 GPR162Q16538 588 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 TXNRD1Q16881 649 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 PLAC9Q5JTB6 97 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 SNX30Q5VWJ9 437 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 TUBA3EQ6PEY2 450 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ATF7IPQ6VMQ6 1270 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ZNF551Q7Z340 670 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 SFTPA1Q8IWL2 248 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ZNF366Q8N895 744 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 BEND2Q8NDZ0 799 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 SRFBP1Q8NEF9 429 aaKnown RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ABHD11Q8NFV4 315 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 CREB3L4Q8TEY5 395 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 LENG9Q96B70 501 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 RNFT2Q96EX2 444 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 Q96MF0 132 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 NUDT16L1Q9BRJ7 211 aaKnown RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 GHITMQ9H3K2 345 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 VEZTQ9HBM0 779 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 SEMA4BQ9NPR2 832 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 ABHD10Q9NUJ1 306 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 BEX4Q9NWD9 120 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 TAS2R10Q9NYW0 307 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 VPS4AQ9UN37 437 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 CAMK2AQ9UQM7 478 aa5.53□□□□□ -1.52
SCFD1-209ENST00000553280 RSF1Q96T23 1441 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-209ENST00000553280 TMCC2O75069 709 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 PTP4A3O75365 173 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 KAT7O95251 611 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 METTL18O95568 372 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 SCGB1D1O95968 90 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CLEC3BP05452 202 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 ARSAP15289 507 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 PCSK6P29122 969 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CYP2C18P33260 490 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 MCM7P33993 719 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 RAD52P43351 418 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CDH15P55291 814 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 LMAN2Q12907 356 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CCNG2Q16589 344 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 RUNDC3AQ59EK9 446 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 ZNF766Q5HY98 468 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 KYAT3Q6YP21 454 aaKnown RBP5.52□□□□□ -1.53
SCFD1-209ENST00000553280 RHOUQ7L0Q8 258 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CPLX4Q7Z7G2 160 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 ADGRG6Q86SQ4 1221 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 LAS2Q8IYD9 372 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 OR8H2Q8N162 312 aa5.52□□□□□ -1.53
SCFD1-209ENST00000553280 C1orf131Q8NDD1 294 aaKnown RBP5.52□□□□□ -1.53
SCFD1-209ENST00000553280 CUL5Q93034 780 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms