RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 FBXL19Q6PCT2 694 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 HTR3DQ70Z44 454 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 SND1Q7KZF4 910 aaKnown RBP eCLIP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 DPH6Q7L8W6 267 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 FMR1NBQ8N0W7 255 aaPredicted RBP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 EID2Q8N6I1 236 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 FBXO18Q8NFZ0 1043 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 OR5B17Q8NGF7 314 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 OR6B3Q8NGW1 331 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 NUDT8Q8WV74 236 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 UCMAQ8WVF2 138 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 OVCA2Q8WZ82 227 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 TTC9Q92623 222 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 P2RY11Q96G91 374 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 DUSP9Q99956 384 aaKnown RBP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 MRPL45Q9BRJ2 306 aaKnown RBP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 B3GNT5Q9BYG0 378 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 ELOVL4Q9GZR5 314 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 PCED1AQ9H1Q7 454 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 SNX25Q9H3E2 840 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 DPEP3Q9H4B8 488 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 IGSF5Q9NSI5 407 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 RBAKQ9NYW8 714 aaPredicted RBP5.66□□□□□ -1.5
HOXB3-213ENST00000552000 NME7Q9Y5B8 376 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 F8P00451 2351 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 ESPL1Q14674 2120 aa5.66□□□□□ -1.5
HOXB3-213ENST00000552000 CCDC168Q8NDH2 2452 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 MED13Q9UHV7 2174 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 MDM4O15151 490 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 PAPSS1O43252 624 aaPredicted RBP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 TLR5O60602 858 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 SEMA4FO95754 770 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 TNNC2P02585 160 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ITGAVP06756 1048 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 EPHX1P07099 455 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ZDHHC11BP0C7U3 371 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 CDK4P11802 303 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 PTPN1P18031 435 aaKnown RBP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ACO1P21399 889 aaKnown RBP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ABCB4P21439 1286 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 PRKCHP24723 683 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 CD27P26842 260 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 SSTR4P31391 388 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ABCD1P33897 745 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 DDIT3P35638 169 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 GNL1P36915 607 aaPredicted RBP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 TUBP50607 506 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 COPAP53621 1224 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 SLC5A3P53794 718 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 MFAP3P55082 362 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ENPP2Q13822 863 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ZNF234Q14588 700 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 GEN1Q17RS7 908 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 BROXQ5VW32 411 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 SNX30Q5VWJ9 437 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 KDM7AQ6ZMT4 941 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 SFR1Q86XK3 245 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 CCDC83Q8IWF9 413 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ZNF248Q8NDW4 579 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 OR2T3Q8NH03 318 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 WFDC12Q8WWY7 111 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 SORCS1Q8WY21 1168 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 BIRC7Q96CA5 298 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 MED8Q96G25 268 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ANKRD36BP1Q96IX9 119 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 CEP63Q96MT8 703 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 KCNK16Q96T55 309 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ELF4Q99607 663 aaPredicted RBP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 CIPCQ9C0C6 399 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 LHX5Q9H2C1 402 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 ST6GALNAC4Q9H4F1 302 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 PCIF1Q9H4Z3 704 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 PRM3Q9NNZ6 103 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 OSGEPQ9NPF4 335 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 BRD7Q9NPI1 651 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.65□□□□□ -1.55e-7■■■■■ 97.5
HOXB3-213ENST00000552000 BLOC1S4Q9NUP1 217 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 TBC1D7Q9P0N9 293 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 IL17BQ9UHF5 180 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 LSM7Q9UK45 103 aaKnown RBP5.65□□□□□ -1.5
HOXB3-213ENST00000552000 CLCA2Q9UQC9 943 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 RNF114Q9Y508 228 aa5.65□□□□□ -1.5
HOXB3-213ENST00000552000 TRPM6Q9BX84 2022 aa5.65□□□□□ -1.51
HOXB3-213ENST00000552000 DIDO1Q9BTC0 2240 aaKnown RBP5.64□□□□□ -1.51
HOXB3-213ENST00000552000 CELSR2Q9HCU4 2923 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 A8MXQ7 604 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 NPC1O15118 1278 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 KLK10O43240 276 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 DFNA5O60443 496 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 TSPAN3O60637 253 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 NTRK1P04629 796 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 ABL2P42684 1182 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 ZNF132P52740 706 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 BCAT1P54687 386 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 UCNP55089 124 aa5.64□□□□□ -1.51
HOXB3-213ENST00000552000 RACK1P63244 317 aaKnown RBP5.64□□□□□ -1.51
HOXB3-213ENST00000552000 GOLGA8FQ08AF8 430 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms