RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 C9orf64Q5T6V5 341 aa22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 NADSYN1Q6IA69 706 aa22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 MSANTD2Q6P1R3 559 aa22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 DHX40Q8IX18 779 aaKnown RBP22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 SCML4Q8N228 414 aa22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 PRORYQ9H606 182 aa22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 HESX1Q9UBX0 185 aa22.49■■□□□ 1.19
SMARCD1-212ENST00000551966 KNTC1P50748 2209 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 ACSL4O60488 711 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 ITGAVP06756 1048 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 CSKP41240 450 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 TARDBPQ13148 414 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 CST6Q15828 149 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 CBWD6Q4V339 395 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 CBWD3Q5JTY5 395 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 CBWD5Q5RIA9 395 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 EID2Q8N6I1 236 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 TSC1Q92574 1164 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 FAM129BQ96TA1 746 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 IRX2Q9BZI1 471 aaPredicted RBP22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 CNGB3Q9NQW8 809 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 ADAMTS1Q9UHI8 967 aa22.48■■□□□ 1.19
SMARCD1-212ENST00000551966 TP53BP1Q12888 1972 aaPredicted RBP22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 TTC34A8MYJ7 566 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 O00370 1275 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 RFPL3O75679 317 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 C1SP09871 688 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 CD19P15391 556 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 CD38P28907 300 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 CTSOP43234 321 aaPredicted RBP22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 ACADVLP49748 655 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 SEMG2Q02383 582 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 BNIP3Q12983 259 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 CUL2Q13617 745 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 ARID5BQ14865 1188 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 FSCBQ5H9T9 825 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 MMS22LQ6ZRQ5 1243 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 MMAAQ8IVH4 418 aaKnown RBP22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 MFN1Q8IWA4 741 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 UNC45BQ8IWX7 931 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 SIX6OS1Q8N1H7 587 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 UBR7Q8N806 425 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 OR2T34Q8NGX1 318 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 SLC35F5Q8WV83 523 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 SLC39A7Q92504 469 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 AZIN2Q96A70 460 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 NXPE2Q96DL1 559 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 PRICKLE1Q96MT3 831 aaPredicted RBP22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 COQ4Q9Y3A0 265 aa22.47■■□□□ 1.19
SMARCD1-212ENST00000551966 PIK3R2O00459 728 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 IRAK2O43187 625 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 RNASEH1O60930 286 aaKnown RBP22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 RNASEH2AO75792 299 aaKnown RBP22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 VDRP11473 427 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 ABCB4P21439 1286 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 SLC8A1P32418 973 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 SLC11A2P49281 568 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 RGS7P49802 495 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 NDUFA8P51970 172 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 ST8SIA6P61647 398 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 RPS24P62847 133 aaKnown RBP22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 C19orf57Q0VDD7 668 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 RTP5Q14D33 572 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 EDRF1Q3B7T1 1238 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 C6orf118Q5T5N4 469 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 PMF1Q6P1K2 205 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 FBXL19Q6PCT2 694 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 AADATQ8N5Z0 425 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 CLEC4CQ8WTT0 213 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 TFAP2BQ92481 460 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 AASDHPPTQ9NRN7 309 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 SLCO3A1Q9UIG8 710 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 ERVW-1Q9UQF0 538 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 AK5Q9Y6K8 562 aa22.46■■□□□ 1.19
SMARCD1-212ENST00000551966 FAM237AA0A1B0GTK4 181 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 LRRC72A6NJI9 287 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 STX10O60499 249 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 ASLP04424 464 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 CDK4P11802 303 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 HNF1BP35680 557 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 CCR5P51681 352 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 TBX4P57082 545 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 HES3Q5TGS1 186 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 KDM1BQ8NB78 822 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 SNX21Q969T3 373 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 CCDC47Q96A33 483 aaKnown RBP22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 SKA1Q96BD8 255 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 OMDQ99983 421 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 ZSWIM1Q9BR11 485 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 FZD4Q9ULV1 537 aa22.45■■□□□ 1.18
SMARCD1-212ENST00000551966 TARSL2A2RTX5 802 aaKnown RBP22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 TK2O00142 265 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 ATXN7O15265 892 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 FYNP06241 537 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 SETSIPP0DME0 302 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 EPHA8P29322 1005 aaPredicted RBP22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 SYKP43405 635 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 PITRM1Q5JRX3 1037 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 NUGGCQ68CJ6 796 aa22.44■■□□□ 1.18
SMARCD1-212ENST00000551966 LCLAT1Q6UWP7 414 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms