RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 MAP3K7O43318 606 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 USP12O75317 370 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 GNAT1P11488 350 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 SKIP12755 728 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 SMPD1P17405 629 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 RAB27AP51159 221 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 PCLAFQ15004 111 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 ZRSR2Q15696 482 aaKnown RBP13.39□□□□□ -0.27
CACNB3-219ENST00000551544 SLC25A52Q3SY17 297 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 DNAL1Q4LDG9 190 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 CYS1Q717R9 158 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 PID1Q7Z2X4 250 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 HACE1Q8IYU2 909 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 ZNF567Q8N184 647 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 SHCBP1LQ9BZQ2 653 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 PNPOQ9NVS9 261 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 ZNF358Q9NW07 568 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 CPSF2Q9P2I0 782 aaKnown RBP13.39□□□□□ -0.27
CACNB3-219ENST00000551544 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 RPS6KL1Q9Y6S9 549 aa13.39□□□□□ -0.27
CACNB3-219ENST00000551544 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 M0QYT0 321 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 OPHN1O60890 802 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 BAG2O95816 211 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 SNAI1O95863 264 aaPredicted RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 MMP3P08254 477 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 ACAT1P24752 427 aaKnown RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 YY1P25490 414 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 NDUFV1P49821 464 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 SLC25A3Q00325 362 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 CDK18Q07002 472 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 NET1Q7Z628 596 aaPredicted RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 CMC1Q7Z7K0 106 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 OR6J1Q8NGC5 347 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 SHKBP1Q8TBC3 707 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 HSFY1Q96LI6 401 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 TTC1Q99614 292 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 FERMT1Q9BQL6 677 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 RNF39Q9H2S5 420 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 TMEM216Q9P0N5 145 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 ZNF212Q9UDV6 495 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 PIRO00625 290 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 GJA5P36382 358 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 RABGGTBP53611 331 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 PDK1Q15118 436 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 TBCCQ15814 346 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 PPP4R1Q8TF05 950 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 EMID1Q96A84 441 aaPredicted RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 IFT43Q96FT9 208 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 DLGAP2Q9P1A6 1054 aa13.38□□□□□ -0.27
CACNB3-219ENST00000551544 PIN4Q9Y237 131 aaKnown RBP13.38□□□□□ -0.27
CACNB3-219ENST00000551544 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 F8W8V4 182 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 GPR32O75388 356 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 BEST1O76090 585 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 SERPINE1P05121 402 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 SCNN1AP37088 669 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 SOX4Q06945 474 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 TUBB3Q13509 450 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 TRMT5Q32P41 509 aaKnown RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 VWA5B1Q5TIE3 1220 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 SYPL2Q5VXT5 272 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 OR52E8Q6IFG1 317 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 ALKAL1Q6UXT8 129 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 KBTBD2Q8IY47 623 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 OR52K1Q8NGK4 314 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 ADAM32Q8TC27 787 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 ANGPTL2Q9UKU9 493 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 HUS1O60921 280 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 PROCP04070 461 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 POLBP06746 335 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 ABCG1P45844 678 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 RPL34P49207 117 aaKnown RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 CCNA1P78396 465 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 ITGA9Q13797 1035 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 DGKDQ16760 1214 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 STXBP5Q5T5C0 1151 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 OTUD1Q5VV17 481 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 MAVSQ7Z434 540 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 DPP9Q86TI2 863 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 TNS4Q8IZW8 715 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 CERS2Q96G23 380 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 KATNBL1Q9H079 304 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 EIF2B3Q9NR50 452 aaKnown RBP13.37□□□□□ -0.27
CACNB3-219ENST00000551544 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
CACNB3-219ENST00000551544 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
CACNB3-219ENST00000551544 EEF2KO00418 725 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms