RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 OSGEPQ9NPF4 335 aa16.75■□□□□ 0.27
CHMP1A-209ENST00000550872 DLGAP2Q9P1A6 1054 aa16.75■□□□□ 0.27
CHMP1A-209ENST00000550872 OR12D3Q9UGF7 316 aa16.75■□□□□ 0.27
CHMP1A-209ENST00000550872 FZD10Q9ULW2 581 aa16.75■□□□□ 0.27
CHMP1A-209ENST00000550872 MYO18AQ92614 2054 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 A0A1B0GVM2 712 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 TCAF2A6NFQ2 919 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 DRGXA6NNA5 263 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 E9PAM4 449 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 PRPSAP2O60256 369 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 RNF40O75150 1001 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 LRCH4O75427 683 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 LUC7L3O95232 432 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 AIF1P55008 147 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 SEC13P55735 322 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 SCAPQ12770 1279 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 CDH18Q13634 790 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 GSE1Q14687 1217 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 C5orf22Q49AR2 442 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 RNF43Q68DV7 783 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 Q6ZS52 159 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 ANKS1BQ7Z6G8 1248 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 ALYREFQ86V81 257 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 CIR1Q86X95 450 aaPredicted RBP16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 CCDC26Q8TAB7 109 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 WFDC5Q8TCV5 224 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 CHRDQ9H2X0 955 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 ABCB8Q9NUT2 735 aa16.74■□□□□ 0.27
CHMP1A-209ENST00000550872 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 TMEM110-MUSTN1A8MSY1 372 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 PRRT4C9JH25 899 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 CLDN11O75508 207 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 PABPC1P11940 636 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 HLA-FP30511 346 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 PCK1P35558 622 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 SSR1P43307 286 aaKnown RBP16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 IRAK1P51617 712 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 CDH4P55283 916 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 NRG1Q02297 640 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 ZNF177Q13360 481 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 GEN1Q17RS7 908 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 C2orf27AQ580R0 203 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 ERMARDQ5T6L9 678 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 EMC10Q5UCC4 262 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 DAB2IPQ5VWQ8 1189 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 ZNF683Q8IZ20 524 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 PYROXD2Q8N2H3 581 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 NIPA2Q8N8Q9 360 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 DTWD2Q8NBA8 298 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 ACRBPQ8NEB7 543 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 PEBP4Q96S96 227 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 PRRX2Q99811 253 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 GPATCH2LQ9NWQ4 482 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 MPP6Q9NZW5 540 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 KIAA1522Q9P206 1035 aaPredicted RBP16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 LCMT1Q9UIC8 334 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 GGA2Q9UJY4 613 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 USP18Q9UMW8 372 aa16.73■□□□□ 0.27
CHMP1A-209ENST00000550872 CACNA1IQ9P0X4 2223 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 IGLV3-10A0A075B6K4 115 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 ANTXRLA6NF34 631 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 FAM72CH0Y354 149 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 CNTN5O94779 1100 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 PROSCO94903 275 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 CD70P32970 193 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 TIE1P35590 1138 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 NOP2P46087 812 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 KRT83P78385 493 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 LMAN2Q12907 356 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 GAS6Q14393 721 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 MESDQ14696 234 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 ALFQ53S48 1182 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 FSCBQ5H9T9 825 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 FAM72AQ5TYM5 149 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 FAM72DQ6L9T8 149 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 RWDD4Q6NW29 188 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 CHST9Q7L1S5 443 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 FAM72BQ86X60 149 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 SPEM1Q8N4L4 309 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 RPLP0P6Q8NHW5 317 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 WFIKKN2Q8TEU8 576 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 USP33Q8TEY7 942 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 UCMAQ8WVF2 138 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 IER2Q9BTL4 223 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 SNRNP25Q9BV90 132 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 ZYG11BQ9C0D3 744 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 DHX35Q9H5Z1 703 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 TFR2Q9UP52 801 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 AP4E1Q9UPM8 1137 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
CHMP1A-209ENST00000550872 TIMM44O43615 452 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 CREB3O43889 395 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 ATG13O75143 517 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 MTA2O94776 668 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 LRIG2O94898 1065 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 L1CAMP32004 1257 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms