RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 DEFB106AQ8N104 65 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 PRMT1Q99873 361 aaKnown RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 SCNM1Q9BWG6 230 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 TMEM121BQ9BXQ6 578 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 RSPH9Q9H1X1 276 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 SLCO3A1Q9UIG8 710 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 DNAJC12Q9UKB3 198 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 PCDHGC3Q9UN70 934 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 PI4KAP42356 2102 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 SPEGQ15772 3267 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 SIN3BO75182 1162 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 GRAP2O75791 330 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 LUC7L3O95232 432 aaKnown RBP13.81□□□□□ -0.2
CPSF6-204ENST00000547486 MTIF2P46199 727 aaKnown RBP13.81□□□□□ -0.2
CPSF6-204ENST00000547486 CSNK1EP49674 416 aaKnown RBP13.81□□□□□ -0.2
CPSF6-204ENST00000547486 NUMBP49757 651 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 C9orf64Q5T6V5 341 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 ZNF557Q8N988 423 aaPredicted RBP13.81□□□□□ -0.2
CPSF6-204ENST00000547486 PPP1R13BQ96KQ4 1090 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 FAM81BQ96LP2 452 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 SLC2A13Q96QE2 648 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 TRIM62Q9BVG3 475 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 CLSTN2Q9H4D0 955 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.81□□□□□ -0.2
CPSF6-204ENST00000547486 CHMP5Q9NZZ3 219 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 ERVW-1Q9UQF0 538 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.81□□□□□ -0.2
CPSF6-204ENST00000547486 ADAMTS9Q9P2N4 1935 aa13.81□□□□□ -0.2
CPSF6-204ENST00000547486 CKAP5Q14008 2032 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 SYNJ2BP-COX16A0A087WUM0 186 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 TTC34A8MYJ7 566 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 H0Y626 953 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 APOEP02649 317 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 DNTTP04053 509 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 ERBB2P04626 1255 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 PROS1P07225 676 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 ZBTB16Q05516 673 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 CDH18Q13634 790 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 HNRNPA1L2Q32P51 320 aaKnown RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 HSP90AA4PQ58FG1 418 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 MIIPQ5JXC2 388 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 FAM183BPQ6ZVS7 135 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 CIR1Q86X95 450 aaPredicted RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 DHX40Q8IX18 779 aaKnown RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 RPL10LQ96L21 214 aaKnown RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 ORAI3Q9BRQ5 295 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 ZDHHC5Q9C0B5 715 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 BTBD1Q9H0C5 482 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 PCED1AQ9H1Q7 454 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 GAREM1Q9H706 876 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 FBRSQ9HAH7 460 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 PLCB1Q9NQ66 1216 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 COX16Q9P0S2 106 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 KIAA1522Q9P206 1035 aaPredicted RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 SERGEFQ9UGK8 458 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 MUC22E2RYF6 1773 aaPredicted RBP13.8□□□□□ -0.2
CPSF6-204ENST00000547486 ZFHX4Q86UP3 3567 aa13.8□□□□□ -0.2
CPSF6-204ENST00000547486 MAP1BP46821 2468 aaKnown RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 A0A1B0GVT2 93 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 TYW5A2RUC4 315 aaKnown RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 FSBPO95073 299 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 SEMA4FO95754 770 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ASLP04424 464 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 GLI1P08151 1106 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ST8SIA6P61647 398 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 CDK17Q00537 523 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ECT2LQ008S8 904 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 PTK2Q05397 1052 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 KCNMA1Q12791 1236 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 MAN2A1Q16706 1144 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 TPD52L1Q16890 204 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 HLA-BQ31612 363 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 VWA3BQ502W6 1294 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 EFHC1Q5JVL4 640 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ZNF776Q68DI1 518 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 OR6B2Q6IFH4 312 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 OLFML1Q6UWY5 402 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 UNQ6494/PRO21346Q6UXR6 183 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 C11orf57Q6ZUT1 292 aaPredicted RBP13.79□□□□□ -0.2
CPSF6-204ENST00000547486 CHSY1Q86X52 802 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ATP6V0D2Q8N8Y2 350 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 KDM1BQ8NB78 822 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 SNX19Q92543 992 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 FAM129BQ96TA1 746 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
CPSF6-204ENST00000547486 PABPC3Q9H361 631 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms