RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF683Q8IZ20 524 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 BPIFB1Q8TDL5 484 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 P3H4Q92791 437 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 MAGEB5Q9BZ81 275 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 CDH22Q9UJ99 828 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 FAM50BQ9Y247 325 aa16.32■□□□□ 0.2
TRAFD1-203ENST00000547063 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CTAGE15A4D2H0 777 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 DCLK1O15075 740 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CLDN11O75508 207 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 ZNF189O75820 626 aaPredicted RBP16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 AMPD1P23109 780 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 SLC6A4P31645 630 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 GGCXP38435 758 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 MAPKAPK2P49137 400 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CDH4P55283 916 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 DYNLT1P63172 113 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 PAFAH1B3Q15102 231 aaKnown RBP16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 MPPE1Q53F39 396 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 MPP7Q5T2T1 576 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CHST9Q7L1S5 443 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 ANKS1BQ7Z6G8 1248 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 C14orf80Q86SX3 495 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CTAGE6Q86UF2 777 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CCDC117Q8IWD4 279 aaPredicted RBP16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 BBS7Q8IWZ6 715 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 PQLC3Q8N755 202 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 RTL3Q8N8U3 475 aaKnown RBP16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 TDRD5Q8NAT2 981 aaKnown RBP16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 WBP2Q969T9 261 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 TMA16Q96EY4 203 aaKnown RBP16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 MYADMQ96S97 322 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 TMEM248Q9NWD8 314 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 EPS15L1Q9UBC2 864 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 SNX10Q9Y5X0 201 aa16.31■□□□□ 0.2
TRAFD1-203ENST00000547063 BRWD1Q9NSI6 2320 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 DOCK8Q8NF50 2099 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 DOCK4Q8N1I0 1966 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 A0A1B0GVM2 712 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 TCAF2A6NFQ2 919 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 NCAM2O15394 837 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 MBTPS2O43462 519 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 IFNAR2P48551 515 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 TUBB4BP68371 445 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 CCNG2Q16589 344 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 LRRC49Q8IUZ0 686 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 PLD5Q8N7P1 536 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 ZNF557Q8N988 423 aaPredicted RBP16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 DEPDC1BQ8WUY9 529 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 OSCP1Q8WVF1 389 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 ELSPBP1Q96BH3 223 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 RUNDC3BQ96NL0 473 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 FEZ2Q9UHY8 353 aaPredicted RBP16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 NEU3Q9UQ49 428 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 NR2E1Q9Y466 385 aa16.3■□□□□ 0.2
TRAFD1-203ENST00000547063 HEPACAM2A8MVW5 462 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 PDE2AO00408 941 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 ECI2O75521 394 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 MX2P20592 715 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 VIPR2P41587 438 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 OXCT1P55809 520 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 LMNB2Q03252 620 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 LEXMQ3ZCV2 418 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 NCBP2-AS2Q69YL0 99 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 POTEHQ6S545 545 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 ADAT2Q7Z6V5 191 aaKnown RBP16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 SETD3Q86TU7 594 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 MFSD6LQ8IWD5 586 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 YAF2Q8IY57 180 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 C12orf50Q8NA57 414 aaPredicted RBP16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 DDI1Q8WTU0 396 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 IGSF8Q969P0 613 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 HAUS1Q96CS2 278 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 FERMT1Q9BQL6 677 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 BRD8Q9H0E9 1235 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 DUS2Q9NX74 493 aaKnown RBP16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 MPP6Q9NZW5 540 aa16.29■□□□□ 0.2
TRAFD1-203ENST00000547063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 TCRBV7S2A1N4TA0A589 114 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 GRXCR2A6NFK2 248 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 GFRA2O00451 464 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 MCF2LO15068 1137 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 TSPAN3O60637 253 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 NFATC1O95644 943 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 FCARP24071 287 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 CHRNA3P32297 505 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 ETFBP38117 255 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 NDST2P52849 883 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 YBEYP58557 167 aaPredicted RBP16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 ADCY2Q08462 1091 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 ZNF177Q13360 481 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms