RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 SDCCAG8Q86SQ7 713 aaPredicted RBP16.99■□□□□ 0.31
BRF1-208ENST00000546997 ZDHHC17Q8IUH5 632 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 SIX6OS1Q8N1H7 587 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 TBC1D10AQ9BXI6 508 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 ULBP1Q9BZM6 244 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 DDX56Q9NY93 547 aaKnown RBP16.99■□□□□ 0.31
BRF1-208ENST00000546997 SLC27A5Q9Y2P5 690 aa16.99■□□□□ 0.31
BRF1-208ENST00000546997 LINC01553A4QN01 128 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 CAPN15O75808 1086 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 URODP06132 367 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 KRT10P13645 584 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 SNX16P57768 344 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 ZFYVE27Q5T4F4 411 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 TMEM154Q6P9G4 183 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 SLC26A9Q7LBE3 791 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 TDRPQ86YL5 185 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 SCN4BQ8IWT1 228 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 ARFGAP1Q8N6T3 406 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 ITFG2Q969R8 447 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 ERP27Q96DN0 273 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 DDX23Q9BUQ8 820 aaKnown RBP16.98■□□□□ 0.31
BRF1-208ENST00000546997 SCOCQ9UIL1 159 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 CHKBQ9Y259 395 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 PLXNA3P51805 1871 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 C2CD4BA6NLJ0 364 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 NVLO15381 856 aaKnown RBP16.98■□□□□ 0.31
BRF1-208ENST00000546997 ACSL3O95573 720 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 ASMTLO95671 621 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 USP17L7P0C7H9 530 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 CREB1P16220 341 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 IVDP26440 423 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 CTNNB1P35222 781 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 DDR2Q16832 855 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 OR52E8Q6IFG1 317 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 SPOCD1Q6ZMY3 1216 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 POLNQ7Z5Q5 900 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 LONP2Q86WA8 852 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 CCDC25Q86WR0 208 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 SCAMP5Q8TAC9 235 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 GDAP1Q8TB36 358 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 C17orf80Q9BSJ5 609 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 OXCT2Q9BYC2 517 aaPredicted RBP16.98■□□□□ 0.31
BRF1-208ENST00000546997 ZBP1Q9H171 429 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 SMG5Q9UPR3 1016 aaKnown RBP16.98■□□□□ 0.31
BRF1-208ENST00000546997 NAALADL1Q9UQQ1 740 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 NEU2Q9Y3R4 380 aa16.98■□□□□ 0.31
BRF1-208ENST00000546997 LRCH4O75427 683 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 TJP3O95049 919 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 GAS8O95995 478 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 FOXN2P32314 431 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 PTPN7P35236 360 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 SLC25A11Q02978 314 aaKnown RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 DUSP4Q13115 394 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 SPARCL1Q14515 664 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 RASA2Q15283 850 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 KAZNQ674X7 775 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 HFE2Q6ZVN8 426 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 GPR152Q8TDT2 470 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 RXFP2Q8WXD0 754 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 FAM118BQ9BPY3 351 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 PNPLA8Q9NP80 782 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 ASIC3Q9UHC3 531 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 YJEFN3A6XGL0 299 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 TNFRSF10BO14763 440 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 ZWINTO95229 277 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 T-ENOLP0DO92 83 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 BMPR1AP36894 532 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 MLLT3P42568 568 aaPredicted RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 CDKN2BP42772 138 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 MAGEA11P43364 429 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 SLC5A3P53794 718 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 SH3BGRP55822 239 aaPredicted RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 DAOAP59103 153 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 PDK4Q16654 411 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 GSTA3Q16772 222 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 MUM1Q2TAK8 710 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 RAB6CQ53S08 254 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 TFDP3Q5H9I0 405 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 SH3PXD2AQ5TCZ1 1133 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 BHLHA9Q7RTU4 235 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 SPPL2BQ8TCT7 592 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 DENND1AQ8TEH3 1009 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 ACSF2Q96CM8 615 aaPredicted RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 POM121Q96HA1 1249 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 CFAP57Q96MR6 1250 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 SEPT5Q99719 369 aaPredicted RBP16.97■□□□□ 0.31
BRF1-208ENST00000546997 RAB6CQ9H0N0 254 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 CNGB3Q9NQW8 809 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 PDP2Q9P2J9 529 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 PHTF1Q9UMS5 762 aa16.97■□□□□ 0.31
BRF1-208ENST00000546997 hCG_1818297A0A087WSY0 165 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 C3orf70A6NLC5 250 aaPredicted RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 EDF1O60869 148 aaKnown RBP16.96■□□□□ 0.31
BRF1-208ENST00000546997 CSPG5O95196 566 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 ZBED1O96006 694 aa16.96■□□□□ 0.31
BRF1-208ENST00000546997 CA3P07451 260 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms