RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 PRR5-ARHGAP8B1AHC4 643 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 KPNA4O00629 521 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 PHGDHO43175 533 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 USP12O75317 370 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 DSG3P32926 999 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 HADHBP55084 474 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 ARHGAP8P85298 464 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 TRAF2Q12933 501 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 FBXO16Q8IX29 292 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 GTF3C2Q8WUA4 911 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 CERS2Q96G23 380 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 RPRD1AQ96P16 312 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 CCDC28BQ9BUN5 200 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 NMUR2Q9GZQ4 415 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 POMKQ9H5K3 350 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 RMND5AQ9H871 391 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 PSMD12O00232 456 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 OCM2P0CE71 109 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 OCMP0CE72 109 aaPredicted RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 NAGLUP54802 743 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 TGFB2P61812 414 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 FOLH1Q04609 750 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 C10orf120Q5SQS8 335 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 DACT2Q5SW24 774 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 MIER2Q8N344 545 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 C2orf69Q8N8R5 385 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 GSTCDQ8NEC7 633 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 VAT1Q99536 393 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 BBS2Q9BXC9 721 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 FOXO6A8MYZ6 492 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 CRADDP78560 199 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 CAMK1DQ8IU85 385 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 RP9Q8TA86 221 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 CASP10Q92851 521 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 STXBP5LQ9Y2K9 1186 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 UMODL1Q5DID0 1318 aa12.47□□□□□ -0.41
NPC1L1-204ENST00000546276 ERI2A8K979 691 aaKnown RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 UQCRBP14927 111 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 LRPAP1P30533 357 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 TTKP33981 857 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 OAZ1P54368 228 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SYTL3Q4VX76 610 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 RBM44Q6ZP01 1051 aaKnown RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 TTC7BQ86TV6 843 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SLC44A1Q8WWI5 657 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SH3KBP1Q96B97 665 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 PIF1Q9H611 641 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 NT5MQ9NPB1 228 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 RRN3Q9NYV6 651 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 POLG2Q9UHN1 485 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 PACSIN3Q9UKS6 424 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 DPPA5A6NC42 116 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 ITGB5P18084 799 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 FGFR3P22607 806 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 PSMB4P28070 264 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 ABCG1P45844 678 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 FKBP1AP62942 108 aaKnown RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SPDYE7PQ495Y7 208 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 WDR60Q8WVS4 1066 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SNRNP25Q9BV90 132 aaKnown RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 MID1IP1Q9NPA3 183 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 ARHGEF3Q9NR81 526 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 PEX1O43933 1283 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 TGDSO95455 350 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 BPGMP07738 259 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SNAPC2Q13487 334 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 TTLL9Q3SXZ7 439 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 LLGL2Q6P1M3 1020 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 ZCCHC7Q8N3Z6 543 aaKnown RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 SEPT5Q99719 369 aaPredicted RBP12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
NPC1L1-204ENST00000546276 MRC1P22897 1456 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 FAM95CA0A1B0GW59 222 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 HDAC3O15379 428 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 MTA2O94776 668 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 ZBTB7AO95365 584 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 ITGA2BP08514 1039 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 LHX1P48742 406 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 PSME3P61289 254 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 UBE3AQ05086 875 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 PTP4A2Q12974 167 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 RNF220Q5VTB9 566 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 ZDHHC24Q6UX98 284 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 VSIG10LQ86VR7 867 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 PSTKQ8IV42 348 aaKnown RBP12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 FAM9CQ8IZT9 166 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 OR52K1Q8NGK4 314 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 NKX2-3Q8TAU0 364 aa12.46□□□□□ -0.42
NPC1L1-204ENST00000546276 ZNF512Q96ME7 567 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms