RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 FAM72CH0Y354 149 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 TRDMT1O14717 391 aaKnown RBP11.1□□□□□ -0.63
PAAF1-216ENST00000546039 CACNG3O60359 315 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 SRGAP2O75044 1071 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 KDELR1P24390 212 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 HOXD9P28356 352 aaPredicted RBP11.1□□□□□ -0.63
PAAF1-216ENST00000546039 MARCKSL1P49006 195 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 HCAR3P49019 387 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 SGSHP51688 502 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 ARSEP51690 589 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 CDH4P55283 916 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
PAAF1-216ENST00000546039 AMPD2Q01433 879 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 DPYSL3Q14195 570 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 ANO4Q32M45 955 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 ATP13A4Q4VNC1 1196 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 ZNF569Q5MCW4 686 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 MEI1Q5TIA1 1274 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 FAM72AQ5TYM5 149 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 FYB2Q5VWT5 728 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 FAM72DQ6L9T8 149 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 RHBDF2Q6PJF5 856 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 RFX8Q6ZV50 586 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 FAM72BQ86X60 149 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 TMEM25Q86YD3 366 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 UBALD2Q8IYN6 164 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 SLC35F6Q8N357 371 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 KCTD6Q8NC69 237 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 EXD1Q8NHP7 514 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 TSC1Q92574 1164 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 KRT35Q92764 455 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 IGSF8Q969P0 613 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 MSANTD3Q96H12 275 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 XPO6Q96QU8 1125 aaKnown RBP11.1□□□□□ -0.63
PAAF1-216ENST00000546039 C8orf33Q9H7E9 229 aaPredicted RBP11.1□□□□□ -0.63
PAAF1-216ENST00000546039 CATSPERBQ9H7T0 1116 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 KLHL11Q9NVR0 708 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 DONSONQ9NYP3 566 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 GTSE1Q9NYZ3 720 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
PAAF1-216ENST00000546039 STIM2Q9P246 746 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 NEU3Q9UQ49 428 aa11.1□□□□□ -0.63
PAAF1-216ENST00000546039 MUC22E2RYF6 1773 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 DDX3YO15523 660 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 DAPK3O43293 454 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 NARSO43776 548 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 TBL1XO60907 577 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CLDN11O75508 207 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 LUC7L3O95232 432 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 TYRP14679 529 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 GLULP15104 373 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 RHOQP17081 205 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 GOT1P17174 413 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 EPHB2P29323 1055 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 DEKP35659 375 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CETN2P41208 172 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 EIF2DP41214 584 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 MAPKAPK2P49137 400 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 OXCT1P55809 520 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 RWDD2BP57060 319 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 COPS2P61201 443 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CDH18Q13634 790 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 ARTNQ5T4W7 220 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 RWDD4Q6NW29 188 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 C1orf228Q6PIY5 440 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 ZSCAN30Q86W11 494 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 MFN1Q8IWA4 741 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CCDC117Q8IWD4 279 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CFAP52Q8N1V2 620 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 C17orf53Q8N3J3 647 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 BHMTQ93088 406 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 EXOC4Q96A65 974 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 MYEOVQ96EZ4 313 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CSPG4P5Q96PW8 444 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CALN1Q9BXU9 219 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 SLC2A11Q9BYW1 496 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 MAGEB5Q9BZ81 275 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 PRDM16Q9HAZ2 1276 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 TMEM248Q9NWD8 314 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CWC15Q9P013 229 aaKnown RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 PACSIN2Q9UNF0 486 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-216ENST00000546039 JRKLQ9Y4A0 524 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 ANKRD36A6QL64 1941 aa11.09□□□□□ -0.63
PAAF1-216ENST00000546039 CKAP5Q14008 2032 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-216ENST00000546039 WASH4PA8MWX3 477 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.08□□□□□ -0.64
PAAF1-216ENST00000546039 CNTN5O94779 1100 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 CD48P09326 243 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 CTHP32929 405 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 GJA4P35212 333 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 PTPN7P35236 360 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 PEX5P50542 639 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 IRAK1P51617 712 aa11.08□□□□□ -0.64
PAAF1-216ENST00000546039 GNG11P61952 73 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms