RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CYP4V2Q6ZWL3 525 aaPredicted RBP21.14■□□□□ 0.97
HMGA2-211ENST00000545998 CIR1Q86X95 450 aaPredicted RBP21.14■□□□□ 0.97
HMGA2-211ENST00000545998 CCDC112Q8NEF3 446 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 WFDC5Q8TCV5 224 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 LRFN3Q9BTN0 628 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 PCSK1NQ9UHG2 260 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 LCMT1Q9UIC8 334 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 USP18Q9UMW8 372 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 TFR2Q9UP52 801 aa21.14■□□□□ 0.97
HMGA2-211ENST00000545998 DRGXA6NNA5 263 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 PROSCO94903 275 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 TNFRSF4P43489 277 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 EFHC2Q5JST6 749 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 MANEALQ5VSG8 457 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 LRRC31Q6UY01 552 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 MFN1Q8IWA4 741 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 SYNPOQ8N3V7 929 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 FIBINQ8TAL6 211 aa21.13■□□□□ 0.97
HMGA2-211ENST00000545998 A0A1B0GVM2 712 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 TBC1D3BA6NDS4 549 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 RCCD1A6NED2 376 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 TCAF2A6NFQ2 919 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 FAM72CH0Y354 149 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 PRPSAP2O60256 369 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 SRGAP2O75044 1071 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 LUC7L3O95232 432 aaKnown RBP21.12■□□□□ 0.97
HMGA2-211ENST00000545998 TCF4P15884 667 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 HLA-FP30511 346 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 FBXO43Q4G163 708 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 FAM72AQ5TYM5 149 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 FAM72DQ6L9T8 149 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 FAM72BQ86X60 149 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 CCAR2Q8N163 923 aaKnown RBP21.12■□□□□ 0.97
HMGA2-211ENST00000545998 PYROXD2Q8N2H3 581 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 CARNMT1Q8N4J0 409 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 ZNF557Q8N988 423 aaPredicted RBP21.12■□□□□ 0.97
HMGA2-211ENST00000545998 ANP32BQ92688 251 aaKnown RBP21.12■□□□□ 0.97
HMGA2-211ENST00000545998 LMLNQ96KR4 655 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 PPARGC1AQ9UBK2 798 aaKnown RBP21.12■□□□□ 0.97
HMGA2-211ENST00000545998 CACNA1IQ9P0X4 2223 aa21.12■□□□□ 0.97
HMGA2-211ENST00000545998 A0A0A6YYK5 440 aaPredicted RBP21.11■□□□□ 0.97
HMGA2-211ENST00000545998 CNTN5O94779 1100 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 IL1R2P27930 398 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 AVPR2P30518 371 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 ARHGAP25P42331 645 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 MAGEA9P43362 315 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 KRT83P78385 493 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 GEN1Q17RS7 908 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 ERMARDQ5T6L9 678 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 NUDT18Q6ZVK8 323 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 CHST9Q7L1S5 443 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 KIAA0907Q7Z7F0 614 aaPredicted RBP21.11■□□□□ 0.97
HMGA2-211ENST00000545998 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.11■□□□□ 0.97
HMGA2-211ENST00000545998 PDLIM2Q96JY6 352 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 SNRNP25Q9BV90 132 aaKnown RBP21.11■□□□□ 0.97
HMGA2-211ENST00000545998 CHRDQ9H2X0 955 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 NEU3Q9UQ49 428 aa21.11■□□□□ 0.97
HMGA2-211ENST00000545998 PRRT4C9JH25 899 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 ARHGAP6O43182 974 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 RNF40O75150 1001 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CLDN11O75508 207 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 LRIG2O94898 1065 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CHRM1P11229 460 aaPredicted RBP21.1■□□□□ 0.97
HMGA2-211ENST00000545998 L1CAMP32004 1257 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 MAN1A1P33908 653 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 VAV2P52735 878 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 HADHBP55084 474 aaKnown RBP21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CDH4P55283 916 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 SLC25A11Q02978 314 aaKnown RBP21.1■□□□□ 0.97
HMGA2-211ENST00000545998 SEMA3BQ13214 749 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CDH18Q13634 790 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 MESDQ14696 234 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 ALFQ53S48 1182 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 FSCBQ5H9T9 825 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 Q6ZS52 159 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 ANKS1BQ7Z6G8 1248 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CPNE8Q86YQ8 564 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 PSTKQ8IV42 348 aaKnown RBP21.1■□□□□ 0.97
HMGA2-211ENST00000545998 DESI2Q9BSY9 194 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 ABCB8Q9NUT2 735 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 GPATCH2LQ9NWQ4 482 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 AP4E1Q9UPM8 1137 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 ANTXRLA6NF34 631 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 H0Y626 953 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 PJA2O43164 708 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CD70P32970 193 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 LMAN2Q12907 356 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 GAS6Q14393 721 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 CCDC117Q8IWD4 279 aaPredicted RBP21.1■□□□□ 0.97
HMGA2-211ENST00000545998 ZYG11BQ9C0D3 744 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 LACRTQ9GZZ8 138 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 MPP6Q9NZW5 540 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 GGA2Q9UJY4 613 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 STARD13Q9Y3M8 1113 aa21.1■□□□□ 0.97
HMGA2-211ENST00000545998 BTNL10A8MVZ5 291 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 PABPC1P11940 636 aaKnown RBP21.09■□□□□ 0.97
HMGA2-211ENST00000545998 KIR2DL1P43626 348 aaPredicted RBP21.09■□□□□ 0.97
HMGA2-211ENST00000545998 SEC13P55735 322 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 CCZ1BP86790 482 aa21.09■□□□□ 0.97
HMGA2-211ENST00000545998 CCZ1P86791 482 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms