RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MAGEA12P43365 314 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 UGT3A1Q6NUS8 523 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.8□□□□□ -1
ATXN3-216ENST00000545170 MSANTD1Q6ZTZ1 278 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 COMMD2Q86X83 199 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 SLC22A9Q8IVM8 553 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 REXO5Q96IC2 774 aaKnown RBP8.8□□□□□ -1
ATXN3-216ENST00000545170 TBCDQ9BTW9 1192 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 TMLHEQ9NVH6 421 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 RAD54BQ9Y620 910 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 SQORQ9Y6N5 450 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 SH3D21A4FU49 640 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 H7C2Y5 167 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 M0QX08 132 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 EPB42P16452 691 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 HNF4AP41235 474 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 ACADVLP49748 655 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 PGDP52209 483 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 CYP4F8P98187 520 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 CDK17Q00537 523 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 GADL1Q6ZQY3 521 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 UBE2J2Q8N2K1 259 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 HSPBAP1Q96EW2 488 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 CHIAQ9BZP6 476 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 TRIM9Q9C026 710 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 MAGEE1Q9HCI5 957 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 GRHL1Q9NZI5 618 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 RPL26L1Q9UNX3 145 aaKnown RBP8.8□□□□□ -1
ATXN3-216ENST00000545170 ERGIC3Q9Y282 383 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 CFAP74Q9C0B2 1584 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 ARHGEF10O15013 1369 aa8.8□□□□□ -1
ATXN3-216ENST00000545170 EIF3DO15371 548 aaKnown RBP eCLIP8.79□□□□□ -1
ATXN3-216ENST00000545170 PRKCQQ04759 706 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ENPEPQ07075 957 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CSHL1Q14406 222 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ZCCHC8Q6NZY4 707 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 ALYREFQ86V81 257 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 C12orf56Q8IXR9 622 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 UCMAQ8WVF2 138 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PGM2Q96G03 612 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 FRMD8P1Q9BZ68 369 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 ISPDA4D126 451 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 LRRC14BA6NHZ5 514 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 TRIM38O00635 465 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 NOL4O94818 638 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 BMP3P12645 472 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PRKACBP22694 351 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 HNMTP50135 292 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 RAB15P59190 212 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ERVK-9P63128 1117 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 RIPK1Q13546 671 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 NAPEPLDQ6IQ20 393 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 R3HCC1LQ7Z5L2 792 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 LINC00523Q86TU6 105 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 TMEM121Q9BTD3 319 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 GCC2Q8IWJ2 1684 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 OR7A10O76100 309 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 YES1P07947 543 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 OMPP47874 163 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ECT2LQ008S8 904 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CACNB2Q08289 660 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 AP3B2Q13367 1082 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CBFBQ13951 182 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ACAD10Q6JQN1 1059 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 TMEM132CQ8N3T6 1108 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 NEDD1Q8NHV4 660 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 IP6K1Q92551 441 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 TRNT1Q96Q11 434 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 ADI1Q9BV57 179 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 DPY30Q9C005 99 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 TRIT1Q9H3H1 467 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.79□□□□□ -1
ATXN3-216ENST00000545170 INVSQ9Y283 1065 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 MYBP10242 640 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 GPD1P21695 349 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 NR4A1P22736 598 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ADRA1DP25100 572 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PHKA2P46019 1235 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 NEK3P51956 506 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 MYBPC1Q00872 1141 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 DLGAP5Q15398 846 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 SYCE2Q6PIF2 218 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ARHGAP36Q6ZRI8 547 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 FASTKD5Q7L8L6 764 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 ELMOD2Q8IZ81 293 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 EFHBQ8N7U6 833 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 FNDC5Q8NAU1 212 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 HELQQ8TDG4 1101 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PHF21BQ96EK2 531 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CAMKK2Q96RR4 588 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 KCNS3Q9BQ31 491 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 EIF2AK1Q9BQI3 630 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 CINPQ9BW66 212 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 GREM2Q9H772 168 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 MID1O15344 667 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CYP4B1P13584 511 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 VCLP18206 1134 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 GPC1P35052 558 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 RFX3P48380 749 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms