RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 DDX43Q9NXZ2 648 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 ABCA9Q8IUA7 1624 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 VAPBO95292 243 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PCNAP12004 261 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 KDELR1P24390 212 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 TTKP33981 857 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 GRK3P35626 688 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 SCNN1BP51168 640 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ATP1A4Q13733 1029 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 NEDD8Q15843 81 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 LRRC38Q5VT99 294 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ZCCHC23Q6ZST2 131 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 NECAB2Q7Z6G3 386 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 CEP41Q9BYV8 373 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 RERGLQ9H628 205 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PADI4Q9UM07 663 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 HOXA2O43364 376 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ASNA1O43681 348 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PPATQ06203 517 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PIWIL2Q8TC59 973 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 TMEM169Q96HH4 297 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 DCUN1D5Q9BTE7 237 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 UNKQ9C0B0 810 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 CEP44Q9C0F1 390 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 CYP1A2P05177 515 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PPP2R1BP30154 601 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 ADIGQ0VDE8 80 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 USP39Q53GS9 565 aaKnown RBP13.38□□□□□ -0.27
TNC-212ENST00000542877 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 CYP2W1Q8TAV3 490 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 LIMD1Q9UGP4 676 aa13.38□□□□□ -0.27
TNC-212ENST00000542877 NCANO14594 1321 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 NBNO60934 754 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 NUDT17P0C025 328 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 PARP6Q2NL67 630 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CYP2R1Q6VVX0 501 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CROCCP3Q8IVE0 287 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 RNF148Q8N7C7 305 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 AGAP11Q8TF27 550 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 BHMTQ93088 406 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 APBA2Q99767 749 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 ETNK2Q9NVF9 386 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 AHSPQ9NZD4 102 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CCDC167Q9P0B6 97 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 ACKR2O00590 384 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CD3EAPO15446 510 aaKnown RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 HS6ST1O60243 411 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 RAMP2O60895 175 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CYP3A4P08684 503 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 ZNF7P17097 686 aaPredicted RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 VCLP18206 1134 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 RBL1P28749 1068 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CASP7P55210 303 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 EPS8Q12929 822 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 RINLQ6ZS11 566 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 SPPL2AQ8TCT8 520 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 MIEF1Q9NQG6 463 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 AAASQ9NRG9 546 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CBX4O00257 560 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 MYL4P12829 197 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CYP2A7P20853 494 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 MAGEA10P43363 369 aaPredicted RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 SERPINH1P50454 418 aaKnown RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 TRIM48Q8IWZ4 208 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 METTL6Q8TCB7 284 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 OLFM1Q99784 485 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 XPNPEP3Q9NQH7 507 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 TLR8Q9NR97 1041 aaKnown RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 KLHL28Q9NXS3 571 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNC-212ENST00000542877 ANXA6P08133 673 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 PIK3R1P27986 724 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 TYW3Q6IPR3 259 aaKnown RBP13.37□□□□□ -0.27
TNC-212ENST00000542877 TMC5Q6UXY8 1006 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 B3GNT6Q6ZMB0 384 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 ZDHHC13Q8IUH4 622 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 LPCAT1Q8NF37 534 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 LRRC19Q9H756 370 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 SNTG2Q9NY99 539 aa13.37□□□□□ -0.27
TNC-212ENST00000542877 CENPXA8MT69 81 aa13.36□□□□□ -0.27
TNC-212ENST00000542877 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
TNC-212ENST00000542877 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
TNC-212ENST00000542877 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
TNC-212ENST00000542877 PIGNO95427 931 aa13.36□□□□□ -0.27
TNC-212ENST00000542877 NEK3P51956 506 aa13.36□□□□□ -0.27
TNC-212ENST00000542877 GTF2A2P52657 109 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms