RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PSTKQ8IV42 348 aaKnown RBP9.65□□□□□ -0.86
DDX55-208ENST00000541259 ZNF683Q8IZ20 524 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 RCOR2Q8IZ40 523 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 EXD1Q8NHP7 514 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 COG1Q8WTW3 980 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 TSC1Q92574 1164 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 FGF14Q92915 247 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 IGSF8Q969P0 613 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 AZIN2Q96A70 460 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 MS4A14Q96JA4 679 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 C1orf74Q96LT6 269 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 OSBPL9Q96SU4 736 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 KXD1Q9BQD3 176 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 DCLK3Q9C098 648 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 TRPV4Q9HBA0 871 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 TMEM51Q9NW97 253 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 CWC15Q9P013 229 aaKnown RBP9.65□□□□□ -0.86
DDX55-208ENST00000541259 VANGL2Q9ULK5 521 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 SNX12Q9UMY4 172 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 NEU3Q9UQ49 428 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.65□□□□□ -0.86
DDX55-208ENST00000541259 COL6A3P12111 3177 aa9.65□□□□□ -0.86
DDX55-208ENST00000541259 NYNRINQ9P2P1 1898 aaKnown RBP9.65□□□□□ -0.86
DDX55-208ENST00000541259 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.87
DDX55-208ENST00000541259 C2CD4DB7Z1M9 353 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 E9PAM4 449 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 EEF2KO00418 725 aaKnown RBP9.64□□□□□ -0.87
DDX55-208ENST00000541259 GFRA2O00451 464 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 CNTN5O94779 1100 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 IL9P15248 144 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 TCF3P15923 654 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 CDKN2BP42772 138 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 SLC11A2P49281 568 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 GRM2Q14416 872 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 PDK2Q15119 407 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 SMAD2Q15796 467 aaKnown RBP9.64□□□□□ -0.87
DDX55-208ENST00000541259 TAZQ16635 292 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ADGRF1Q5T601 910 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 MANEALQ5VSG8 457 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 KAZNQ674X7 775 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 PTCRAQ6ISU1 281 aaPredicted RBP9.64□□□□□ -0.87
DDX55-208ENST00000541259 FBXL22Q6P050 247 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 VITQ6UXI7 678 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 CHSY1Q86X52 802 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
DDX55-208ENST00000541259 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
DDX55-208ENST00000541259 CCDC50Q8IVM0 306 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 LGI2Q8N0V4 545 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 CFAP52Q8N1V2 620 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 NETO2Q8NC67 525 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 PCDH19Q8TAB3 1148 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 BPIFB1Q8TDL5 484 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 RSAD2Q8WXG1 361 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ASIC4Q96FT7 647 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ZFYVE19Q96K21 471 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 HEMGNQ9BXL5 484 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 CALN1Q9BXU9 219 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 KIF9Q9HAQ2 790 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ZFP14Q9HCL3 533 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ETNK2Q9NVF9 386 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 SMARCAL1Q9NZC9 954 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 MPP6Q9NZW5 540 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 EPS15L1Q9UBC2 864 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 STOML2Q9UJZ1 356 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 LSM7Q9UK45 103 aaKnown RBP9.64□□□□□ -0.87
DDX55-208ENST00000541259 MFHAS1Q9Y4C4 1052 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 PCDHB3Q9Y5E6 796 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 WNT6Q9Y6F9 365 aa9.64□□□□□ -0.87
DDX55-208ENST00000541259 ATG2BQ96BY7 2078 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 hCG_1818297A0A087WSY0 165 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 TCRBV7S2A1N4TA0A589 114 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 DRGXA6NNA5 263 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 F5H5T6 163 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 KIF2AO00139 706 aaPredicted RBP9.63□□□□□ -0.87
DDX55-208ENST00000541259 CEP104O60308 925 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 LATS1O95835 1130 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 TUBB4AP04350 444 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 TPI1P60174 286 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 RPS24P62847 133 aaKnown RBP9.63□□□□□ -0.87
DDX55-208ENST00000541259 NRG1Q02297 640 aaPredicted RBP9.63□□□□□ -0.87
DDX55-208ENST00000541259 DPYSQ14117 519 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 ALFQ53S48 1182 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 ODF2Q5BJF6 829 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 RWDD4Q6NW29 188 aaKnown RBP9.63□□□□□ -0.87
DDX55-208ENST00000541259 OTOP3Q7RTS5 596 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 ADAT2Q7Z6V5 191 aaKnown RBP9.63□□□□□ -0.87
DDX55-208ENST00000541259 TMEM25Q86YD3 366 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 FAM217AQ8IXS0 508 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 ZDHHC14Q8IZN3 488 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 ADGRG2Q8IZP9 1017 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 PQLC3Q8N755 202 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 UBE2Q2Q8WVN8 375 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 ELSPBP1Q96BH3 223 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 FAF2Q96CS3 445 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 RBM41Q96IZ5 413 aaKnown RBP9.63□□□□□ -0.87
DDX55-208ENST00000541259 PBKQ96KB5 322 aa9.63□□□□□ -0.87
DDX55-208ENST00000541259 CAPZA3Q96KX2 299 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms