RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ERI2A8K979 691 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 CYBBP04839 570 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 SLC12A3P55017 1021 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 MZT2BQ6NZ67 158 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 ZNF276Q8N554 614 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 VAT1Q99536 393 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 GALNT8Q9NY28 637 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 RAB26Q9ULW5 256 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 MTF2Q9Y483 593 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 RECQL5O94762 991 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 TCF3P15923 654 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 PLIN5Q00G26 463 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 TWF1Q12792 350 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 PQLC1Q8N2U9 271 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 RDH11Q8TC12 318 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 FAM45AQ8TCE6 357 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 RNFT2Q96EX2 444 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 MTMR9Q96QG7 549 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 NUAK2Q9H093 628 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 S100A14Q9HCY8 104 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 CDH9Q9ULB4 789 aa15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 ARIH1Q9Y4X5 557 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-207ENST00000541122 NWD1Q149M9 1564 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 FAM220BPB1ANY3 271 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 ALOX15BO15296 676 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 NUP62P37198 522 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 TAF5Q15542 800 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 FAM228AQ86W67 206 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 LSM7Q9UK45 103 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 DEPDC5O75140 1603 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 DPPA5A6NC42 116 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 EFCAB10A6NFE3 127 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 PTGES3LE9PB15 166 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 KRT6AP02538 564 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF135P52742 658 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 BST2Q10589 180 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 ARHGEF7Q14155 803 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 ANKS6Q68DC2 871 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 CLNKQ7Z7G1 428 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 CHSY1Q86X52 802 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 FAM126BQ8IXS8 530 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 DGCR6LQ9BY27 220 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 HDHD2Q9H0R4 259 aa15.27■□□□□ 0.03
SMARCA4-207ENST00000541122 TPP1O14773 563 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 JCHAINP01591 159 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 LYNP07948 512 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 ABCB1P08183 1280 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 SNRPB2P08579 225 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 ARP10275 920 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 HOXB6P17509 224 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 HMGCS2P54868 508 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 FGD2Q7Z6J4 655 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 OR56A4Q8NGH8 313 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 GANCQ8TET4 914 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 CHID1Q9BWS9 393 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 MUC3BQ9H195 1237 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 KLHL31Q9H511 634 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 RMI1Q9H9A7 625 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 ETNK2Q9NVF9 386 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 MBD2Q9UBB5 411 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 PCDHA11Q9Y5I1 949 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 TGDSO95455 350 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 KDELR1P24390 212 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 CHKAP35790 457 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 KLHL17Q6TDP4 642 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 NAT14Q8WUY8 206 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 RTKNQ9BST9 563 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 RIBC2Q9H4K1 309 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 HPS4Q9NQG7 708 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 WDR70Q9NW82 654 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 MOSPD1Q9UJG1 213 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 SPATA2Q9UM82 520 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 EPHB6O15197 1021 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 POU1F1P28069 291 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 GABRB2P47870 512 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 ZNF605Q86T29 641 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 FBXO39Q8N4B4 442 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 TAAR1Q96RJ0 339 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 H0YC42 278 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 PLA2G6O60733 806 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 TM7SF2O76062 418 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 VIL1P09327 827 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 SUPT20HL2P0C7V6 817 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 ETS2P15036 469 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 PDPRQ8NCN5 879 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 UBASH3BQ8TF42 649 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 BTBD9Q96Q07 612 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 PURBQ96QR8 312 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 PDGFCQ9NRA1 345 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 C3orf18Q9UK00 162 aa15.26■□□□□ 0.03
SMARCA4-207ENST00000541122 CHI3L1P36222 383 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-207ENST00000541122 ETFBP38117 255 aa15.25■□□□□ 0.03
SMARCA4-207ENST00000541122 VPS72Q15906 364 aa15.25■□□□□ 0.03
SMARCA4-207ENST00000541122 NFIL3Q16649 462 aa15.25■□□□□ 0.03
SMARCA4-207ENST00000541122 PGS1Q32NB8 556 aa15.25■□□□□ 0.03
SMARCA4-207ENST00000541122 CBWD6Q4V339 395 aa15.25■□□□□ 0.03
SMARCA4-207ENST00000541122 CBWD3Q5JTY5 395 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms