RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 TMEM245Q9H330 911 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 RETREG1Q9H6L5 497 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 SGK2Q9HBY8 427 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 CD248Q9HCU0 757 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 ZDHHC4Q9NPG8 344 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 PLCB1Q9NQ66 1216 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 WSB2Q9NYS7 404 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-208ENST00000540683 STIM2Q9P246 746 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 ANGPTL2Q9UKU9 493 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 NAALADL1Q9UQQ1 740 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 CEP192Q8TEP8 1941 aa10.75□□□□□ -0.69
CDCA3-208ENST00000540683 CKAP5Q14008 2032 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 EDDM13A0A1B0GTR0 161 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ARHGAP33O14559 1287 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 TM4SF5O14894 197 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 DFNA5O60443 496 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 CLDN11O75508 207 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 KCNK5O95279 499 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 TRIM16O95361 564 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 CER1O95813 267 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 IGLV3-25P01717 112 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 UCHL3P15374 230 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ENGP17813 658 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 CDK11BP21127 795 aaKnown RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 TACR2P21452 398 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ITPKAP23677 461 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 NUDT1P36639 197 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 MATKP42679 507 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 PTGER3P43115 390 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 NOVA1P51513 510 aaKnown RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ZNF177Q13360 481 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 SUZ12Q15022 739 aaKnown RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 INAVAQ3KP66 663 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ZC3H12AQ5D1E8 599 aaKnown RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 KLHDC7AQ5VTJ3 777 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 RFWD3Q6PCD5 774 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ARMCX6Q7L4S7 300 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ARCQ7LC44 396 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ADIPOR2Q86V24 386 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 ERICH1Q86X53 443 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 LGI2Q8N0V4 545 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 GANCQ8TET4 914 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 DNASE2BQ8WZ79 361 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 C18orf8Q96DM3 657 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 CPXM1Q96SM3 734 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 MKRN2Q9H000 416 aaKnown RBP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDCA3-208ENST00000540683 SLC25A13Q9UJS0 675 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 HCN2Q9UL51 889 aa10.74□□□□□ -0.69
CDCA3-208ENST00000540683 LAMA1P25391 3075 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 PI4KAP42356 2102 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 LRRC72A6NJI9 287 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 METTL12A8MUP2 240 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 BECN2A8MW95 431 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 WASH3PC4AMC7 463 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 FOXN3O00409 490 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 BCAT2O15382 392 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 DAB1O75553 588 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 ADH1BP00325 375 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 FYNP06241 537 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 CYP11B1P15538 503 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 PRKCHP24723 683 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 CDH5P33151 784 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 CSKP41240 450 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 GABRB2P47870 512 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 AFF3P51826 1226 aaKnown RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 KRT83P78385 493 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 SHC2P98077 582 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 MYL5Q02045 173 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 ELAVL3Q14576 367 aaKnown RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 STX1AQ16623 288 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 HNRNPA1L2Q32P51 320 aaKnown RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 UAP1L1Q3KQV9 507 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 ARL13BQ3SXY8 428 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 SLC45A4Q5BKX6 768 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 PITRM1Q5JRX3 1037 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 FAM46CQ5VWP2 391 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 OLFML1Q6UWY5 402 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 DEFB106AQ8N104 65 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 PGAP3Q96FM1 320 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 RPRD1AQ96P16 312 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 SPAG5Q96R06 1193 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 GTPBP2Q9BX10 602 aaKnown RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 GPR174Q9BXC1 333 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 NUCKS1Q9H1E3 243 aaKnown RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 WDCPQ9H6R7 721 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 CAPN10Q9HC96 672 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 OSGEPQ9NPF4 335 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 LMBRD1Q9NUN5 540 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 FZD4Q9ULV1 537 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
CDCA3-208ENST00000540683 CNOT1A5YKK6 2376 aaKnown RBP10.73□□□□□ -0.69
CDCA3-208ENST00000540683 TNRC6BQ9UPQ9 1833 aaKnown RBP10.72□□□□□ -0.69
CDCA3-208ENST00000540683 DNAH14Q0VDD8 3507 aa10.72□□□□□ -0.69
CDCA3-208ENST00000540683 ANKRD62A6NC57 917 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms