RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 SYPP08247 313 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 SERPINF2P08697 491 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 TACR2P21452 398 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 HOXD12P35452 270 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 NOVA1P51513 510 aaKnown RBP9.33□□□□□ -0.92
LMO3-222ENST00000540445 COPAP53621 1224 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 SLC6A3Q01959 620 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 KCNMA1Q12791 1236 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 NME3Q13232 169 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 PLEKHG6Q3KR16 790 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 KLHDC7AQ5VTJ3 777 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 SASS6Q6UVJ0 657 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 FAM183BPQ6ZVS7 135 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 KIAA0907Q7Z7F0 614 aaPredicted RBP9.33□□□□□ -0.92
LMO3-222ENST00000540445 CHSY1Q86X52 802 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 HDDC3Q8N4P3 179 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 TMEM35BQ8NCS4 154 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 C1orf131Q8NDD1 294 aaKnown RBP9.33□□□□□ -0.92
LMO3-222ENST00000540445 OR2T3Q8NH03 318 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 SLC39A13Q96H72 371 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 VPS16Q9H269 839 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 TMEM245Q9H330 911 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 FSCN3Q9NQT6 498 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 DDIT4Q9NX09 232 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 KIAA1522Q9P206 1035 aaPredicted RBP9.33□□□□□ -0.92
LMO3-222ENST00000540445 XPO7Q9UIA9 1087 aaKnown RBP9.33□□□□□ -0.92
LMO3-222ENST00000540445 AJAP1Q9UKB5 411 aaPredicted RBP9.33□□□□□ -0.92
LMO3-222ENST00000540445 NFE2L3Q9Y4A8 694 aa9.33□□□□□ -0.92
LMO3-222ENST00000540445 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 FAM170AA1A519 330 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 M0QYT0 321 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 OPHN1O60890 802 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 HSF2BPO75031 334 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 LUC7L3O95232 432 aaKnown RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 DNTTP04053 509 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 ERBB2P04626 1255 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 C7P10643 843 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 CYP11B1P15538 503 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 CSRP1P21291 193 aaKnown RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 EEF1GP26641 437 aaKnown RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 CCR1P32246 355 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 NOS2P35228 1153 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 NNMTP40261 264 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 CSKP41240 450 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 NUMBP49757 651 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 PITX1P78337 314 aaPredicted RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 PTPRNQ16849 979 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 FSCBQ5H9T9 825 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 DCAF12L1Q5VU92 463 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 TAF3Q5VWG9 929 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 RNF219Q5W0B1 726 aaPredicted RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 LRSAM1Q6UWE0 723 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 ERICH1Q86X53 443 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 DHX40Q8IX18 779 aaKnown RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 FAM71AQ8IYT1 594 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.32□□□□□ -0.92
LMO3-222ENST00000540445 CADM4Q8NFZ8 388 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 GANCQ8TET4 914 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 SNX19Q92543 992 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 MYEOVQ96EZ4 313 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 PRICKLE1Q96MT3 831 aaPredicted RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 SIK2Q9H0K1 926 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 SLC32A1Q9H598 525 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 CAPN10Q9HC96 672 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 PRSS16Q9NQE7 514 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 ASNSD1Q9NWL6 643 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 TAB2Q9NYJ8 693 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 USP36Q9P275 1121 aaKnown RBP9.32□□□□□ -0.92
LMO3-222ENST00000540445 SUSD2Q9UGT4 822 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 WASF3Q9UPY6 502 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 NCKAP1Q9Y2A7 1128 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 FHOD1Q9Y613 1164 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 PLXNA2O75051 1894 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 PTPRBP23467 1997 aa9.32□□□□□ -0.92
LMO3-222ENST00000540445 CFAP47Q6ZTR5 3102 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 RNASEH1O60930 286 aaKnown RBP9.31□□□□□ -0.92
LMO3-222ENST00000540445 IGLV3-25P01717 112 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 ASLP04424 464 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 CEACAM1P13688 526 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 UCHL3P15374 230 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 ZNF18P17022 549 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 CDK11BP21127 795 aaKnown RBP9.31□□□□□ -0.92
LMO3-222ENST00000540445 RPS14P62263 151 aaKnown RBP9.31□□□□□ -0.92
LMO3-222ENST00000540445 ECT2LQ008S8 904 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 TTC31Q49AM3 519 aaPredicted RBP9.31□□□□□ -0.92
LMO3-222ENST00000540445 PTPN20Q4JDL3 420 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 PITRM1Q5JRX3 1037 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 RABGAP1LQ5R372 815 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 FKBP15Q5T1M5 1219 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 SND1Q7KZF4 910 aaKnown RBP eCLIP9.31□□□□□ -0.92
LMO3-222ENST00000540445 ZDHHC17Q8IUH5 632 aa9.31□□□□□ -0.92
LMO3-222ENST00000540445 APCDD1Q8J025 514 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms