RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CHD4Q14839 1912 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 CFAP99D6REC4 459 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 LRCH4O75427 683 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 DNAJB2P25686 324 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 NEK3P51956 506 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 BCAT1P54687 386 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 PSME3P61289 254 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 ATP1A4Q13733 1029 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 DAW1Q8N136 415 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 DIS3LQ8TF46 1054 aaKnown RBP13.31□□□□□ -0.28
DNMT1-203ENST00000540357 BRD8Q9H0E9 1235 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 POMPQ9Y244 141 aa13.31□□□□□ -0.28
DNMT1-203ENST00000540357 ADCY6O43306 1168 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 CD4P01730 458 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 PDGFRBP09619 1106 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 ERVK-10P10266 1014 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 ABL2P42684 1182 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 LAMTOR4Q0VGL1 99 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 GRM1Q13255 1194 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 ACOT1Q86TX2 421 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 PDSS2Q86YH6 399 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 SLC7A14Q8TBB6 771 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 USP33Q8TEY7 942 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 MYO5AQ9Y4I1 1855 aaKnown RBP13.3□□□□□ -0.28
DNMT1-203ENST00000540357 CDH2P19022 906 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-203ENST00000540357 JOSD2Q8TAC2 188 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 RCN3Q96D15 328 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 E5RJQ4 531 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 KRT8P05787 483 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 POLD1P28340 1107 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 GNL1P36915 607 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-203ENST00000540357 NDST1P52848 882 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 KLF1Q13351 362 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-203ENST00000540357 OSCP1Q8WVF1 389 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 SUPT7LO94864 414 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 SLC4A1P02730 911 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 CXCL8P10145 99 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 ADSSP30520 456 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 GEMP55040 296 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 CDR2LQ86X02 465 aaPredicted RBP13.3□□□□□ -0.28
DNMT1-203ENST00000540357 URGCPQ8TCY9 931 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 MAN1C1Q9NR34 630 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 RIC8BQ9NVN3 520 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 STK39Q9UEW8 545 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 CPSF3Q9UKF6 684 aaKnown RBP13.3□□□□□ -0.28
DNMT1-203ENST00000540357 PPM1HQ9ULR3 514 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
DNMT1-203ENST00000540357 BCLAF3A2AJT9 711 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 M0QYT0 321 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 MLNP12872 115 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 GALK1P51570 392 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 GDF10P55107 478 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 BST2Q10589 180 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 CDH17Q12864 832 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SQLEQ14534 574 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 CYP2R1Q6VVX0 501 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 DHRSXQ8N5I4 330 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 IL31RAQ8NI17 732 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 BORCS5Q969J3 196 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 TLE6Q9H808 572 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SPAG4Q9NPE6 437 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 CYB561D2O14569 222 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 VAPBO95292 243 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 DLDP09622 509 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 IVDP26440 423 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SNX17Q15036 470 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 RALGPS1Q5JS13 557 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SLC4A11Q8NBS3 891 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 NFASCO94856 1347 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 NR5A2O00482 541 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 AOC1P19801 751 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 CSE1LP55060 971 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 CDH8P55286 799 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 MSLNQ13421 630 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 AHI1Q8N157 1196 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 ASB7Q9H672 318 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SNX15Q9NRS6 342 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 DAPK2Q9UIK4 370 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 PACSIN3Q9UKS6 424 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 TRHDEQ9UKU6 1024 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 ERI2A8K979 691 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 TMEM63AO94886 807 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 EIF2B2P49770 351 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 IDH3AP50213 366 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 PTPN20Q4JDL3 420 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 LIPMQ5VYY2 423 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 ARMC3Q5W041 872 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 CCDC60Q8IWA6 550 aaPredicted RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 DDX1Q92499 740 aaKnown RBP13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SIK2Q9H0K1 926 aa13.29□□□□□ -0.28
DNMT1-203ENST00000540357 SDCBP2Q9H190 292 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms