RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
SCARB1-206ENST00000539320 ST8SIA6P61647 398 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 HSP90AA4PQ58FG1 418 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 DCAF12L1Q5VU92 463 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 C11orf57Q6ZUT1 292 aaPredicted RBP22.98■■□□□ 1.27
SCARB1-206ENST00000539320 FAM183BPQ6ZVS7 135 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 FAM124AQ86V42 546 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 SLC47A2Q86VL8 602 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 DEFB106AQ8N104 65 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 ZCCHC9Q8N567 271 aaKnown RBP22.98■■□□□ 1.27
SCARB1-206ENST00000539320 PCED1AQ9H1Q7 454 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 SLC32A1Q9H598 525 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.98■■□□□ 1.273e-6■■■■□ 23.8
SCARB1-206ENST00000539320 DDIT4Q9NX09 232 aa22.98■■□□□ 1.27
SCARB1-206ENST00000539320 A0A1B0GTW7 788 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 METTL12A8MUP2 240 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 UPK3BL1B0FP48 263 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 UPK3BL2E5RIL1 263 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 F5H5T6 163 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 FOXN3O00409 490 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-206ENST00000539320 CLCN1P35523 988 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 KRT9P35527 623 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 RPS14P62263 151 aaKnown RBP22.97■■□□□ 1.27
SCARB1-206ENST00000539320 ZBTB16Q05516 673 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 SEMA3BQ13214 749 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 EIF4EBP2Q13542 120 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-206ENST00000539320 TTC31Q49AM3 519 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-206ENST00000539320 PTPN20Q4JDL3 420 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 PITRM1Q5JRX3 1037 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 EFHC1Q5JVL4 640 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 ZNF776Q68DI1 518 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-206ENST00000539320 OR6B2Q6IFH4 312 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 OLFML1Q6UWY5 402 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 FAM71AQ8IYT1 594 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 OR2I1PQ8NGU4 316 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 MYO19Q96H55 970 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 MIR1-1HGQ9H1L0 117 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 SYNCQ9H7C4 482 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 SLC12A6Q9UHW9 1150 aa22.97■■□□□ 1.27
SCARB1-206ENST00000539320 SYNJ2BP-COX16A0A087WUM0 186 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 H0Y626 953 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 PES1O00541 588 aaKnown RBP22.96■■□□□ 1.27
SCARB1-206ENST00000539320 DAB1O75553 588 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 GRAP2O75791 330 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 MOCS3O95396 460 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 DNTTP04053 509 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 ERBB2P04626 1255 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 SLC2A3P11169 496 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 SNX16P57768 344 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 GRIK2Q13002 908 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 RAPGEF1Q13905 1077 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 KCNJ12Q14500 433 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 FSCBQ5H9T9 825 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 MMS22LQ6ZRQ5 1243 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 PIP4P1Q86T03 277 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 MRGPRX3Q96LB0 322 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 DNAAF2Q9NVR5 837 aaKnown RBP22.96■■□□□ 1.27
SCARB1-206ENST00000539320 COX16Q9P0S2 106 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 KIAA1522Q9P206 1035 aaPredicted RBP22.96■■□□□ 1.27
SCARB1-206ENST00000539320 FHOD1Q9Y613 1164 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 KNL1Q8NG31 2342 aa22.96■■□□□ 1.27
SCARB1-206ENST00000539320 KCNU1A8MYU2 1149 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 ABCB4P21439 1286 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 CCR1P32246 355 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 BPIFB4P59827 614 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 HNRNPA1L2Q32P51 320 aaKnown RBP22.95■■□□□ 1.26
SCARB1-206ENST00000539320 CT47A1Q5JQC4 288 aaPredicted RBP22.95■■□□□ 1.26
SCARB1-206ENST00000539320 TTC39BQ5VTQ0 682 aaPredicted RBP22.95■■□□□ 1.26
SCARB1-206ENST00000539320 DPY19L2P1Q6NXN4 242 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 SLC26A9Q7LBE3 791 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 KDM1BQ8NB78 822 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 RNF34Q969K3 372 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 PRMT1Q99873 361 aaKnown RBP22.95■■□□□ 1.26
SCARB1-206ENST00000539320 ZDHHC5Q9C0B5 715 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 MTG2Q9H4K7 406 aa22.95■■□□□ 1.26
SCARB1-206ENST00000539320 ACSL1P33121 698 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 FOXC1Q12948 553 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 DRAP1Q14919 205 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 RABGAP1LQ5R372 815 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 CLEC17AQ6ZS10 378 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 CIR1Q86X95 450 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 ZNF397Q8NF99 534 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 SNX19Q92543 992 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 BTBD1Q9H0C5 482 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 RSPH9Q9H1X1 276 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 C6orf106Q9H6K1 298 aaPredicted RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 PLCB1Q9NQ66 1216 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 SAMSN1Q9NSI8 373 aaKnown RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 EIF2B4Q9UI10 523 aaKnown RBP22.94■■□□□ 1.26
SCARB1-206ENST00000539320 ERVW-1Q9UQF0 538 aa22.94■■□□□ 1.26
SCARB1-206ENST00000539320 ITIH6Q6UXX5 1313 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 A0A1B0GVM2 712 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 TCAF2A6NFQ2 919 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 BCAT2O15382 392 aaPredicted RBP22.93■■□□□ 1.26
SCARB1-206ENST00000539320 SIN3BO75182 1162 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 GJB3O75712 270 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 SEMA4FO95754 770 aa22.93■■□□□ 1.26
SCARB1-206ENST00000539320 SRPRAP08240 638 aaKnown RBP22.93■■□□□ 1.26
SCARB1-206ENST00000539320 EEF1GP26641 437 aaKnown RBP22.93■■□□□ 1.26
SCARB1-206ENST00000539320 CTSOP43234 321 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms