RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 M0QZ92 97 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 CCDC22O60826 627 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 CNTFP26441 200 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 HOXC8P31273 242 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 NPWQ8N729 165 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 GIMAP7Q8NHV1 300 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 SLC38A7Q9NVC3 462 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 IRF5Q13568 498 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 DENND2DQ9H6A0 471 aaPredicted RBP25.56■■□□□ 1.68
RAB40C-204ENST00000538492 MAGED2Q9UNF1 606 aaPredicted RBP25.56■■□□□ 1.68
RAB40C-204ENST00000538492 RPS6KL1Q9Y6S9 549 aa25.56■■□□□ 1.68
RAB40C-204ENST00000538492 PEX11AO75192 247 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 ENTPD5O75356 428 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 FBXO21O94952 628 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 PTPN3P26045 913 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 LHX1P48742 406 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 SCNN1GP51170 649 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 PDE1CQ14123 709 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-204ENST00000538492 TAF2Q6P1X5 1199 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 RASSF3Q86WH2 238 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 KCNV2Q8TDN2 545 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 BTBD10Q9BSF8 475 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 TLE6Q9H808 572 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 ZFATQ9P243 1243 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 IGSF9Q9P2J2 1179 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 SHROOM3Q8TF72 1996 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 HNRNPCL1O60812 293 aaKnown RBP25.55■■□□□ 1.68
RAB40C-204ENST00000538492 F7P08709 466 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-204ENST00000538492 PAN2Q504Q3 1202 aaKnown RBP25.55■■□□□ 1.68
RAB40C-204ENST00000538492 N4BP2L1Q5TBK1 243 aaPredicted RBP25.55■■□□□ 1.68
RAB40C-204ENST00000538492 RFWD3Q6PCD5 774 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 TTC8Q8TAM2 541 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 GORASP1Q9BQQ3 440 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 KCNK4Q9NYG8 393 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 FBXW11Q9UKB1 542 aa25.55■■□□□ 1.68
RAB40C-204ENST00000538492 ARL5CA6NH57 179 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 LTFP02788 710 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 GMPRP36959 345 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 AQP5P55064 265 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 PDE1BQ01064 536 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 CRLF3Q8IUI8 442 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 PPP1R14CQ8TAE6 165 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 SLC9A7Q96T83 725 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 CNGB3Q9NQW8 809 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 EMCNQ9ULC0 261 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 E2F8A0AVK6 867 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 POLBP06746 335 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 ITGA2BP08514 1039 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 ESRRAP11474 423 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-204ENST00000538492 RPL10AP62906 217 aaKnown RBP25.54■■□□□ 1.68
RAB40C-204ENST00000538492 SEMA3BQ13214 749 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 STX3Q13277 289 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 FASTKD1Q53R41 847 aaKnown RBP25.54■■□□□ 1.68
RAB40C-204ENST00000538492 RINLQ6ZS11 566 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 CCNJLQ8IV13 435 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 FCRL3Q96P31 734 aaPredicted RBP25.54■■□□□ 1.68
RAB40C-204ENST00000538492 NUDCD1Q96RS6 583 aa25.54■■□□□ 1.68
RAB40C-204ENST00000538492 H0Y3Z8 333 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 GYG2O15488 501 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 SNNO75324 88 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-204ENST00000538492 PPM1JQ5JR12 505 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 GNASQ5JWF2 1037 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 CXCL17Q6UXB2 119 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 TMEM86AQ8N2M4 240 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 NTAN1Q96AB6 310 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 RNPEPL1Q9HAU8 725 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 BIRC5O15392 142 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 CAPN15O75808 1086 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 GSRP00390 522 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 KCNA4P22459 653 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 CALB2P22676 271 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 RGS2P41220 211 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 CPA2P48052 419 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 HUNKP57058 714 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 TLDC1Q6P9B6 456 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 KYAT3Q6YP21 454 aaKnown RBP25.53■■□□□ 1.68
RAB40C-204ENST00000538492 N4BP2L2Q92802 583 aaPredicted RBP25.53■■□□□ 1.68
RAB40C-204ENST00000538492 ATXN7L3BQ96GX2 97 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 TUBB6Q9BUF5 446 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 COLEC11Q9BWP8 271 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 TXNDC16Q9P2K2 825 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 PPARGC1AQ9UBK2 798 aaKnown RBP25.53■■□□□ 1.68
RAB40C-204ENST00000538492 Q9Y3F1 56 aa25.53■■□□□ 1.68
RAB40C-204ENST00000538492 ZBTB24O43167 697 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-204ENST00000538492 RAB41Q5JT25 222 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 CERS2Q96G23 380 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 NAT9Q9BTE0 207 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 HBS1LQ9Y450 684 aaKnown RBP25.52■■□□□ 1.68
RAB40C-204ENST00000538492 TRPV2Q9Y5S1 764 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 LYPLA1O75608 230 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-204ENST00000538492 SCAPQ12770 1279 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 CST9Q5W186 159 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 GDF6Q6KF10 455 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-204ENST00000538492 PDZD4Q76G19 769 aaPredicted RBP25.52■■□□□ 1.68
RAB40C-204ENST00000538492 DNAAF3Q8N9W5 541 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 TKTL2Q9H0I9 626 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 TRPM7Q96QT4 1865 aa25.52■■□□□ 1.68
RAB40C-204ENST00000538492 HHLA1C9JL84 531 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 GSC2O15499 205 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 FAM163BP0C2L3 166 aa25.51■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms