RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ARHGEF19Q8IW93 802 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 TMEM199Q8N511 208 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 SPACA7Q96KW9 195 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 UROC1Q96N76 676 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 TINF2Q9BSI4 451 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 C2orf49Q9BVC5 232 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 RERGLQ9H628 205 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 TMBIM4Q9HC24 238 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 IL17RBQ9NRM6 502 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 GPR15P49685 360 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 CREMQ03060 361 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 N4BP2L1Q5TBK1 243 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-205ENST00000538291 MAP4K3Q8IVH8 894 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 KAZALD1Q96I82 304 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 CPNE1Q99829 537 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 EPS8L2Q9H6S3 715 aa17.16■□□□□ 0.34
SCARB1-205ENST00000538291 SEC22BO75396 215 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 CCDC130P13994 396 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 EIF4BP23588 611 aaKnown RBP17.15■□□□□ 0.34
SCARB1-205ENST00000538291 WDR93Q6P2C0 686 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 PALB2Q86YC2 1186 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 POMGNT2Q8NAT1 580 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 METTL6Q8TCB7 284 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 SPPL2AQ8TCT8 520 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 USP7Q93009 1102 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 WBP4O75554 376 aaKnown RBP17.15■□□□□ 0.34
SCARB1-205ENST00000538291 NUDT14O95848 222 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 MT-CO1P00395 513 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 NFICP08651 508 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 PSMC3P17980 439 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 CRYMQ14894 314 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 RASA2Q15283 850 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 FAM45BPQ6NSW5 357 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 FNDC5Q8NAU1 212 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 TRPC4APQ8TEL6 797 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 ULBP1Q9BZM6 244 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 TCF7L2Q9NQB0 619 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 VTI1BQ9UEU0 232 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 ANKRD6Q9Y2G4 727 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 SLC45A4Q5BKX6 768 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 CDKAL1Q5VV42 579 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 FAM180AQ6UWF9 173 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 TPGS1Q6ZTW0 290 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 NYAP1Q6ZVC0 841 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 GPR141Q7Z602 305 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 STK40Q8N2I9 435 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 TNS2Q63HR2 1409 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 H3BMM5 538 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 KCNK1O00180 336 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 PTPRAP18433 802 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 VGLL4Q14135 290 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 NTRK3Q16288 839 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 OMDQ99983 421 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 SLC40A1Q9NP59 571 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 MID1IP1Q9NPA3 183 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-205ENST00000538291 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
SCARB1-205ENST00000538291 DNALI1O14645 258 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-205ENST00000538291 GUCY1B2O75343 617 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 SERPINE1P05121 402 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 PTENP60484 403 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 KIAA0895Q8NCT3 520 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 CENPTQ96BT3 561 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 DTNBP1Q96EV8 351 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 PRDM16Q9HAZ2 1276 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 POLR1DQ9Y2S0 133 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 CRYL1Q9Y2S2 319 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 TRAV19A0A0A6YYK7 116 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 SARSP49591 514 aaKnown RBP17.14■□□□□ 0.33
SCARB1-205ENST00000538291 TMEM119Q4V9L6 283 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 C16orf62Q7Z3J2 963 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 TRAPPC5Q8IUR0 188 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 ZDHHC6Q9H6R6 413 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 ADCY6O43306 1168 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 TRIM13O60858 407 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 SCNN1GP51170 649 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
SCARB1-205ENST00000538291 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 CLYBLQ8N0X4 340 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 ZNF655Q8N720 491 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-205ENST00000538291 STARD8Q92502 1023 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 MAP10Q9P2G4 905 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 ADRM1Q16186 407 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 FAM98BQ52LJ0 330 aaKnown RBP17.14■□□□□ 0.33
SCARB1-205ENST00000538291 PAGE2BQ5JRK9 111 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 UNC93AQ86WB7 457 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 ZSWIM2Q8NEG5 633 aa17.14■□□□□ 0.33
SCARB1-205ENST00000538291 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
SCARB1-205ENST00000538291 TCRBV5S4A2TA0A5A2 114 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 BTN3A1O00481 513 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CXCL17Q6UXB2 119 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 TMEM134Q9H6X4 195 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 AVENQ9NQS1 362 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 TMEM150BA6NC51 233 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CYP2C18P33260 490 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 ZBTB45Q96K62 511 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 NSMCE2Q96MF7 247 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms