RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 NKD1Q969G9 470 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 MYO19Q96H55 970 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 HEXIM2Q96MH2 286 aaKnown RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 NOX5Q96PH1 765 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 CCDC3Q9BQI4 270 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 B3GNT5Q9BYG0 378 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 DPEP3Q9H4B8 488 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 C17orf75Q9HAS0 396 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 IL37Q9NZH6 218 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 CYTH4Q9UIA0 394 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 RABGEF1Q9UJ41 708 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 FZD4Q9ULV1 537 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 PLA2G4CQ9UP65 541 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 LOXL2Q9Y4K0 774 aa9.93□□□□□ -0.82
CPSF7-217ENST00000537162 RP1L1Q8IWN7 2480 aaPredicted RBP9.93□□□□□ -0.82
CPSF7-217ENST00000537162 A0A1W2PQ27 194 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 A0A1W2PQ64 194 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 A0A1W2PQC6 194 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 EFCAB7A8K855 629 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 MAGEC1O60732 1142 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 RTN3O95197 1032 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 PIGRP01833 764 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 PDGFAP04085 211 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SLC8A1P32418 973 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 ARSDP51689 593 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 MAPK10P53779 464 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SLC5A3P53794 718 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 TFAMQ00059 246 aaKnown RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SRSF11Q05519 484 aaKnown RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 OVGP1Q12889 678 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 EIF3IQ13347 325 aaKnown RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SPNS3Q6ZMD2 512 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 CHST9Q7L1S5 443 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 FAM177A1Q8N128 213 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SLC22A18ASQ8N1D0 253 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 ZNF548Q8NEK5 533 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 OR13H1Q8NG92 308 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 ERMNQ8TAM6 284 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 LARP6Q9BRS8 491 aaKnown RBP9.92□□□□□ -0.82
CPSF7-217ENST00000537162 DUSP23Q9BVJ7 150 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 CALN1Q9BXU9 219 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 AGXT2Q9BYV1 514 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 EVA1BQ9NVM1 165 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SIX4Q9UIU6 781 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 ENTPD4Q9Y227 616 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
CPSF7-217ENST00000537162 NPHP3-ACAD11A0A0J9YXS1 232 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 SLC12A8A0AV02 714 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 FAM92AA1XBS5 289 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 NEMP2A6NFY4 417 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 OR52Z1P0C646 297 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 OAS2P29728 719 aaKnown RBP9.91□□□□□ -0.82
CPSF7-217ENST00000537162 MCM7P33993 719 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 ATP5C1P36542 298 aaKnown RBP9.91□□□□□ -0.82
CPSF7-217ENST00000537162 TRAPPC10P48553 1259 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 PSMD8P48556 350 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 NCKAP1LP55160 1127 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 E2F5Q15329 346 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 NR0B2Q15466 257 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
CPSF7-217ENST00000537162 DEFB109BQ30KR1 87 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 ATP1A1-AS1Q5TC04 95 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 RNF20Q5VTR2 975 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 PRPF39Q86UA1 669 aaKnown RBP9.91□□□□□ -0.82
CPSF7-217ENST00000537162 SLC35F3Q8IY50 421 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 CSGALNACT2Q8N6G5 542 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 SYT2Q8N9I0 419 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-217ENST00000537162 ZSWIM2Q8NEG5 633 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 PMEPA1Q969W9 287 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 CATSPER2Q96P56 530 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 MDFIQ99750 246 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 MRPL45Q9BRJ2 306 aaKnown RBP9.91□□□□□ -0.82
CPSF7-217ENST00000537162 FZD3Q9NPG1 666 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 DNAJC28Q9NX36 388 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 KLF15Q9UIH9 416 aa9.91□□□□□ -0.82
CPSF7-217ENST00000537162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-217ENST00000537162 D6RAR5 112 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 CNTN5O94779 1100 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 KRT19P08727 400 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 GOT1P17174 413 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 MUTP22033 750 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 HOXD9P28356 352 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-217ENST00000537162 DRD3P35462 400 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 SMTNP53814 917 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 CCL7P80098 99 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 DHX8Q14562 1220 aaKnown RBP9.9□□□□□ -0.82
CPSF7-217ENST00000537162 C9orf64Q5T6V5 341 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 SP5Q6BEB4 398 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-217ENST00000537162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.9□□□□□ -0.82
CPSF7-217ENST00000537162 ASB18Q6ZVZ8 466 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 SND1Q7KZF4 910 aaKnown RBP eCLIP9.9□□□□□ -0.82
CPSF7-217ENST00000537162 TP53INP2Q8IXH6 220 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 LRRC52Q8N7C0 313 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 TMEM145Q8NBT3 493 aa9.9□□□□□ -0.82
CPSF7-217ENST00000537162 DDI1Q8WTU0 396 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms