RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 WASHC5Q12768 1159 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SMARCB1Q12824 385 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 PPP2R5DQ14738 602 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SLC1A5Q15758 541 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SPANXN3Q5MJ09 141 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 ZNF567Q8N184 647 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 RAET1EQ8TD07 263 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 DQX1Q8TE96 717 aaKnown RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 ZNF75CPQ92670 426 aaPredicted RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 FAM193BQ96PV7 902 aaPredicted RBP13.95□□□□□ -0.18
SMG6-203ENST00000536871 ZIC5Q96T25 663 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 SMOC2Q9H3U7 446 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 TMEM161AQ9NX61 479 aa13.95□□□□□ -0.18
SMG6-203ENST00000536871 TSC2P49815 1807 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 FOXO6A8MYZ6 492 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 KIF3CO14782 793 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 IRAK2O43187 625 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 TGDSO95455 350 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 AP2A1O95782 977 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 ELNP15502 786 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 EPHB2P29323 1055 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
SMG6-203ENST00000536871 CACNA2D1P54289 1103 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 EIF4EBP2Q13542 120 aaPredicted RBP13.94□□□□□ -0.18
SMG6-203ENST00000536871 SH2D5Q6ZV89 423 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 LINC00523Q86TU6 105 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 AGGF1Q8N302 714 aaeCLIP13.94□□□□□ -0.182e-11■■■■□ 26.1
SMG6-203ENST00000536871 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
SMG6-203ENST00000536871 GPATCH11Q8N954 259 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 OR10T2Q8NGX3 314 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 DEPDC1BQ8WUY9 529 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 C8orf48Q96LL4 319 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 TSGA13Q96PP4 275 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 GBA3Q9H227 469 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 COMMD8Q9NX08 183 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 BFARQ9NZS9 450 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
SMG6-203ENST00000536871 TRIM49D1C9J1S8 452 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 HOXA2O43364 376 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 IGFBP6P24592 240 aaPredicted RBP13.93□□□□□ -0.18
SMG6-203ENST00000536871 PTPN3P26045 913 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 HOXC13P31276 330 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 GRIK1P39086 918 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 MAGEA11P43364 429 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 NPY2RP49146 381 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 BFSP2Q13515 415 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 ZKSCAN8Q15776 578 aaPredicted RBP13.93□□□□□ -0.18
SMG6-203ENST00000536871 TAC4Q86UU9 113 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 SLAIN1Q8ND83 568 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 ATP2A3Q93084 1043 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 SERPINB11Q96P15 392 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 MAGEB5Q9BZ81 275 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 MANSC1Q9H8J5 431 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 TMEM30AQ9NV96 361 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 SEPT10Q9P0V9 454 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 SUFUQ9UMX1 484 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 OR6C75A6NL08 312 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 LRIG2O94898 1065 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 SRGAP2BP0DMP2 458 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 PYGBP11216 843 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 CCNCP24863 283 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 PSMB4P28070 264 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 SLC5A3P53794 718 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 GALNTL6Q49A17 601 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 TEX44Q53QW1 395 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 TIGD7Q6NT04 549 aaPredicted RBP13.93□□□□□ -0.18
SMG6-203ENST00000536871 CASC4Q6P4E1 433 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 PRPF39Q86UA1 669 aaKnown RBP13.93□□□□□ -0.18
SMG6-203ENST00000536871 MON1AQ86VX9 555 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 COLGALT2Q8IYK4 626 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 CCDC63Q8NA47 563 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 EDEM1Q92611 657 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 HMX1Q9NP08 348 aaPredicted RBP13.93□□□□□ -0.18
SMG6-203ENST00000536871 STARD7Q9NQZ5 370 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 TXNDC16Q9P2K2 825 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 AAR2Q9Y312 384 aaKnown RBP13.93□□□□□ -0.18
SMG6-203ENST00000536871 MFHAS1Q9Y4C4 1052 aa13.93□□□□□ -0.18
SMG6-203ENST00000536871 FAM72CH0Y354 149 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 I3L4J1 428 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 DNM1LO00429 736 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 TNFRSF10BO14763 440 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 HNRNPCL1O60812 293 aaKnown RBP13.92□□□□□ -0.18
SMG6-203ENST00000536871 CRHR1P34998 444 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 ETV4P43268 484 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 MGAT5Q09328 741 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 ELAVL2Q12926 359 aaKnown RBP13.92□□□□□ -0.18
SMG6-203ENST00000536871 FAM72AQ5TYM5 149 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 ATG16L1Q676U5 607 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 NAPEPLDQ6IQ20 393 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 FAM72DQ6L9T8 149 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 KYAT3Q6YP21 454 aaKnown RBP13.92□□□□□ -0.18
SMG6-203ENST00000536871 FAM72BQ86X60 149 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 ADAM32Q8TC27 787 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 TBC1D31Q96DN5 1066 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 C1orf74Q96LT6 269 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms