RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 OXCT2Q9BYC2 517 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
CDK5RAP3-202ENST00000536708 GPATCH2LQ9NWQ4 482 aa13.36□□□□□ -0.27
CDK5RAP3-202ENST00000536708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.274e-8■□□□□ 8
CDK5RAP3-202ENST00000536708 GMIPQ9P107 970 aa13.36□□□□□ -0.27
CDK5RAP3-202ENST00000536708 MAGED2Q9UNF1 606 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-202ENST00000536708 A0A1W2PQH9 124 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TGM5O43548 720 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 NCAM1P13591 858 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TSHRP16473 764 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 ELF3P78545 371 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 IL9RQ01113 521 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 RAB33AQ14088 237 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 BSPRYQ5W0U4 402 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 RNF43Q68DV7 783 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TLDC1Q6P9B6 456 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 DENND5BQ6ZUT9 1274 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TGS1Q96RS0 853 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SSU72Q9NP77 194 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TLR9Q9NR96 1032 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 ABCF3Q9NUQ8 709 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TBK1Q9UHD2 729 aa13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SMG5Q9UPR3 1016 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CARNS1A5YM72 827 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 EPOPA6NHQ4 379 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 FOXO6A8MYZ6 492 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 E7ESA3 106 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 ATP6V1G2O95670 118 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CXCL14O95715 111 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 PTPN9P43378 593 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 WDR4P57081 412 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 YWHAGP61981 247 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 BNIP1Q12981 228 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TMED2Q15363 201 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 EFHC2Q5JST6 749 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SCYL2Q6P3W7 929 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 PPIL6Q8IXY8 311 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CCDC185Q8N715 623 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TMEM121Q9BTD3 319 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 MAGEB5Q9BZ81 275 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 RXFP1Q9HBX9 757 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 PIGVQ9NUD9 493 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 FNIP2Q9P278 1114 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 USP18Q9UMW8 372 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 PCDHA11Q9Y5I1 949 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 C2orf71A6NGG8 1288 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SGK1O00141 431 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 PRRG1O14668 218 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CAPN9O14815 690 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 MSI1O43347 362 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 RNF8O76064 485 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 ENDOD1O94919 500 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CD48P09326 243 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 OTUD4Q01804 1114 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CCDC15Q0P6D6 951 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 NME3Q13232 169 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 RIPK1Q13546 671 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 FASTKD3Q14CZ7 662 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CGB2Q6NT52 195 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 TAC4Q86UU9 113 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 CCDC63Q8NA47 563 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 SLC7A14Q8TBB6 771 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 ACTL9Q8TC94 416 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 GDPD5Q8WTR4 605 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 HSPH1Q92598 858 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 FBXO32Q969P5 355 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 NPY6RQ99463 290 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 INSL5Q9Y5Q6 135 aa13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-202ENST00000536708 M0QYT0 321 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 MDM4O15151 490 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CST8O60676 142 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CAPN15O75808 1086 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 UBOX5O94941 541 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 FOXN2P32314 431 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 PCK1P35558 622 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TWF1Q12792 350 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 TAF10Q12962 218 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 E2F5Q15329 346 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CA9Q16790 459 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 SLC25A52Q3SY17 297 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 ARCQ7LC44 396 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 GDAP1Q8TB36 358 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 IRGQQ8WZA9 623 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CPT1BQ92523 772 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 CENPIQ92674 756 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 SPATA17Q96L03 361 aa13.33□□□□□ -0.28
CDK5RAP3-202ENST00000536708 KLHL5Q96PQ7 755 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms