RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 CSKP41240 450 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 OXCT1P55809 520 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 RPS24P62847 133 aaKnown RBP17.23■□□□□ 0.35
CCND1-203ENST00000536559 SIM1P81133 766 aaPredicted RBP17.23■□□□□ 0.35
CCND1-203ENST00000536559 TEAD4Q15561 434 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 MAN2A1Q16706 1144 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 PTPRNQ16849 979 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 RABGAP1LQ5R372 815 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 ZNF776Q68DI1 518 aaPredicted RBP17.23■□□□□ 0.35
CCND1-203ENST00000536559 NADSYN1Q6IA69 706 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 CFAP52Q8N1V2 620 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 ZCCHC9Q8N567 271 aaKnown RBP17.23■□□□□ 0.35
CCND1-203ENST00000536559 ZNF366Q8N895 744 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 KDM1BQ8NB78 822 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 SHC3Q92529 594 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 NUCKS1Q9H1E3 243 aaKnown RBP17.23■□□□□ 0.35
CCND1-203ENST00000536559 DNAJC12Q9UKB3 198 aa17.23■□□□□ 0.35
CCND1-203ENST00000536559 KCNU1A8MYU2 1149 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 HSF2BPO75031 334 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 TRIM16O95361 564 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 CER1O95813 267 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 SRPRAP08240 638 aaKnown RBP17.22■□□□□ 0.35
CCND1-203ENST00000536559 TACR2P21452 398 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 RPS14P62263 151 aaKnown RBP17.22■□□□□ 0.35
CCND1-203ENST00000536559 GRIK2Q13002 908 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
CCND1-203ENST00000536559 RAP1GAP2Q684P5 730 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 OR6B2Q6IFH4 312 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
CCND1-203ENST00000536559 CLSTN2Q9H4D0 955 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 SGK2Q9HBY8 427 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 ASNSD1Q9NWL6 643 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 DDIT4Q9NX09 232 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 EIF2B4Q9UI10 523 aaKnown RBP17.22■□□□□ 0.35
CCND1-203ENST00000536559 PCDHGC3Q9UN70 934 aa17.22■□□□□ 0.35
CCND1-203ENST00000536559 PCNX2A6NKB5 2137 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 SYNJ2BP-COX16A0A087WUM0 186 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 SEMA4FO95754 770 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 ERCC5P28715 1186 aaPredicted RBP17.21■□□□□ 0.35
CCND1-203ENST00000536559 MATKP42679 507 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 AFF3P51826 1226 aaKnown RBP17.21■□□□□ 0.35
CCND1-203ENST00000536559 ECT2LQ008S8 904 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 SLC12A1Q13621 1099 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 PITRM1Q5JRX3 1037 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 PIP4P1Q86T03 277 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 DEFB106AQ8N104 65 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 WFDC5Q8TCV5 224 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 PRICKLE1Q96MT3 831 aaPredicted RBP17.21■□□□□ 0.35
CCND1-203ENST00000536559 NDST4Q9H3R1 872 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 COX16Q9P0S2 106 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 CYTH4Q9UIA0 394 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 ERVW-1Q9UQF0 538 aa17.21■□□□□ 0.35
CCND1-203ENST00000536559 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 TARSL2A2RTX5 802 aaKnown RBP17.2■□□□□ 0.34
CCND1-203ENST00000536559 BECN2A8MW95 431 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 ACSL1P33121 698 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 SULT2A1Q06520 285 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 HNRNPA1L2Q32P51 320 aaKnown RBP17.2■□□□□ 0.34
CCND1-203ENST00000536559 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 USP30Q70CQ3 517 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 ZDHHC17Q8IUH5 632 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 OR2I1PQ8NGU4 316 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 OMDQ99983 421 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 RSPH9Q9H1X1 276 aaPredicted RBP17.2■□□□□ 0.34
CCND1-203ENST00000536559 GAREM1Q9H706 876 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 TMEM51Q9NW97 253 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 CACNA1EQ15878 2313 aa17.2■□□□□ 0.34
CCND1-203ENST00000536559 MAP1BP46821 2468 aaKnown RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 EDDM13A0A1B0GTR0 161 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 FOXN3O00409 490 aaPredicted RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 FSBPO95073 299 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 IGLV3-25P01717 112 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 TPM2P07951 284 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 CD59P13987 128 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 NME3Q13232 169 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 RAPGEF1Q13905 1077 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 SUZ12Q15022 739 aaKnown RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 TAF5Q15542 800 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 TRIP6Q15654 476 aaKnown RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 ZNF423Q2M1K9 1284 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 SND1Q7KZF4 910 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCND1-203ENST00000536559 ADAT2Q7Z6V5 191 aaKnown RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 TMEM35BQ8NCS4 154 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 MSANTD4Q8NCY6 345 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 SKA1Q96BD8 255 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 SLC2A13Q96QE2 648 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 CPXM1Q96SM3 734 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 PABPC3Q9H361 631 aaKnown RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 C6orf106Q9H6K1 298 aaPredicted RBP17.19■□□□□ 0.34
CCND1-203ENST00000536559 FBXL12Q9NXK8 326 aa17.19■□□□□ 0.34
CCND1-203ENST00000536559 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms