RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 TNNI1P19237 187 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 FUT4P22083 530 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ME2P23368 584 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 HMOX2P30519 316 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 HOXD12P35452 270 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ATP5OP48047 213 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ACOT2P49753 483 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 BCAP31P51572 246 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CCR3P51677 355 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 HK2P52789 917 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 AP3M2P53677 418 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 TCP10Q12799 353 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 SEMA5AQ13591 1074 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 FLOT2Q14254 428 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ZNF829Q3KNS6 432 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PPM1LQ5SGD2 360 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 SLFN12LQ6IEE8 588 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 NAPRTQ6XQN6 538 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 EEPD1Q7L9B9 569 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CLEC14AQ86T13 490 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 BRSK2Q8IWQ3 736 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PLD5Q8N7P1 536 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CNTD1Q8N815 330 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ANKFN1Q8N957 763 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 MFSD2AQ8NA29 543 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 KYQ8NBH2 561 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 KCTD6Q8NC69 237 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 MCPH1Q8NEM0 835 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PPP1R14CQ8TAE6 165 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 SYTL5Q8TDW5 730 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CHPT1Q8WUD6 406 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PDCD6IPQ8WUM4 868 aaKnown RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ARNTL2Q8WYA1 636 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 TOP1MTQ969P6 601 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 SLCO4A1Q96BD0 722 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 C12orf43Q96C57 262 aaKnown RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ZBTB45Q96K62 511 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CNDP2Q96KP4 475 aaKnown RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CDRT15Q96T59 188 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CORO1BQ9BR76 489 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 TDRD1Q9BXT4 1180 aaKnown RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 SLC4A5Q9BY07 1137 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 NIF3L1Q9GZT8 377 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 POLR3FQ9H1D9 316 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 HIPK3Q9H422 1215 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 RNPEPQ9H4A4 650 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 COG4Q9H9E3 785 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PALMDQ9NP74 551 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PICK1Q9NRD5 415 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CISHQ9NSE2 258 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 RRN3Q9NYV6 651 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 TMOD2Q9NZR1 351 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 FEM1BQ9UK73 627 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 PTBP2Q9UKA9 531 aaKnown RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ADAM28Q9UKQ2 775 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 USP18Q9UMW8 372 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 FAF1Q9UNN5 650 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-215ENST00000536145 SLC8A2Q9UPR5 921 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CLEC11AQ9Y240 323 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 COQ6Q9Y2Z9 468 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 AFG3L2Q9Y4W6 797 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CDY2AQ9Y6F7 541 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 CDY1Q9Y6F8 540 aa7.1□□□□□ -1.27
CPSF7-215ENST00000536145 ANKRD31Q8N7Z5 1873 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 CCDC162PA2VCL2 907 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 HTR3EA5X5Y0 456 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 TRIM43BA6NCK2 446 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 TMEM247A6NEH6 219 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 TCAF2A6NFQ2 919 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 NFIBO00712 420 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 DLGAP1O14490 977 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 KCNN4O15554 427 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 HTRA2O43464 458 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 TADA2AO75478 443 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 ZNF189O75820 626 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 SULT1C4O75897 302 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 DGAT1O75907 488 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 BAIAP3O94812 1187 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 ATE1O95260 518 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 HSPA1AP0DMV8 641 aaKnown RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 HSPA1BP0DMV9 641 aaKnown RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 ZNF24P17028 368 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 NCF2P19878 526 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 DCKP27707 260 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 POLR2BP30876 1174 aaKnown RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 TCF7P36402 384 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 ARL2P36404 184 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 HALP42357 657 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 ASPAP45381 313 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 LIG4P49917 911 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 NUDT2P50583 147 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 PSMD7P51665 324 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 ZNF143P52747 638 aaPredicted RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 MYL6P60660 151 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 PSMC1P62191 440 aaKnown RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 COG7P83436 770 aa7.09□□□□□ -1.27
CPSF7-215ENST00000536145 GRSF1Q12849 480 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 TRAP1Q12931 704 aaKnown RBP7.09□□□□□ -1.27
CPSF7-215ENST00000536145 MTMR1Q13613 665 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms