RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 KRT32Q14532 448 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 FASTKD3Q14CZ7 662 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 EFTUD2Q15029 972 aaKnown RBP eCLIP5.34□□□□□ -1.553e-24■■■■■ 57.3
SNHG1-201ENST00000535076 PFKFB4Q16877 469 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TIGD2Q4W5G0 525 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 EFHC1Q5JVL4 640 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ATAD3BQ5T9A4 648 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PIK3R6Q5UE93 754 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ANXA8L1Q5VT79 327 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 C9orf131Q5VYM1 1079 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RESP18Q5W5W9 173 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ZNF425Q6IV72 752 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 INTS5Q6P9B9 1019 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 APOA5Q6Q788 366 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TMC5Q6UXY8 1006 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 UBE3DQ7Z6J8 389 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ANKLE2Q86XL3 938 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 WFDC3Q8IUB2 231 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SLC22A9Q8IVM8 553 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 RCOR2Q8IZ40 523 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TCAIMQ8N3R3 496 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TTLL6Q8N841 843 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SRFBP1Q8NEF9 429 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NCOA7Q8NI08 942 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SPPL3Q8TCT6 385 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SCFD2Q8WU76 684 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 DEPDC1BQ8WUY9 529 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 UCMAQ8WVF2 138 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ASZ1Q8WWH4 475 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 KLHL29Q96CT2 875 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ZDHHC12Q96GR4 267 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 VPS39Q96JC1 886 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 FAR2Q96K12 515 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PRICKLE1Q96MT3 831 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SERPINB12Q96P63 405 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 SNX18Q96RF0 628 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ZNF184Q99676 751 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 C17orf62Q9BQA9 187 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ADPGKQ9BRR6 497 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 C17orf80Q9BSJ5 609 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PHF20Q9BVI0 1012 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NUP85Q9BW27 656 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 C1QTNF7Q9BXJ2 289 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TGIF2Q9GZN2 237 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ANKRD2Q9GZV1 360 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TWSG1Q9GZX9 223 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.34□□□□□ -1.553e-6■■□□□ 14.4
SNHG1-201ENST00000535076 RBM38Q9H0Z9 239 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PABPC3Q9H361 631 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 NMRK1Q9NWW6 199 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 WWOXQ9NZC7 414 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ANKMY1Q9P2S6 941 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ENTPD4Q9Y227 616 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 TDRKHQ9Y2W6 561 aaKnown RBP5.34□□□□□ -1.55
SNHG1-201ENST00000535076 PCDHB5Q9Y5E4 795 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 MAD1L1Q9Y6D9 718 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 AK5Q9Y6K8 562 aa5.34□□□□□ -1.55
SNHG1-201ENST00000535076 ABCC8Q09428 1581 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RIMS2Q9UQ26 1411 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NRCAMQ92823 1304 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 A0A0B4J269 797 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 SYNDIG1LA6NDD5 238 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ZNF233A6NK53 670 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ATP6V1G2-DDX39BF2Z307 99 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 H3BUI4 141 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 hCG_2039718K7EN88 272 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 MASP2O00187 686 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PSMD11O00231 422 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 AP3D1O14617 1153 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 CAPN9O14815 690 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 KIAA0355O15063 1070 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 VILLO15195 856 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PPM1DO15297 605 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RIPK2O43353 540 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PDE8AO60658 829 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ATG13O75143 517 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 SULT1C4O75897 302 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PIGNO95427 931 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PTBP3O95758 552 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 APOA4P06727 396 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TFPTP0C1Z6 253 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 MYL4P12829 197 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NME2P22392 152 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 F8A1P23610 371 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NTF4P34130 210 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NPY2RP49146 381 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RASSF2P50749 326 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TKTL1P51854 596 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ARFIP1P53367 373 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 COPB1P53618 953 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ATP12AP54707 1039 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 SLC12A2P55011 1212 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NLRP11P59045 1033 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ADAM17P78536 824 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 IFITM2Q01629 132 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 IL1RL1Q01638 556 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ID3Q02535 119 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PLD1Q13393 1074 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 GALNT3Q14435 633 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms