RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 NUDT17P0C025 328 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 HSPA13P48723 471 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 POU4F1Q01851 419 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 KCNMB4Q86W47 210 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 CCDC103Q8IW40 242 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 NUP93Q8N1F7 819 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 C18orf25Q96B23 403 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-206ENST00000534320 APBA2Q99767 749 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 PCDHGB4Q9UN71 923 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 COG5Q9UP83 839 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 AP4S1Q9Y587 144 aa17.62■□□□□ 0.41
PHRF1-206ENST00000534320 MMRN1Q13201 1228 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 TJAP1Q5JTD0 557 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 FAR2Q96K12 515 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 FAM210AQ96ND0 272 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 SOWAHBA6NEL2 793 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 VPS26AO75436 327 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 CST3P01034 146 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-206ENST00000534320 ATXN8OSP0DMR3 200 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 TCN1P20061 433 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-206ENST00000534320 NUP107P57740 925 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 INAQ16352 499 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 PARP6Q2NL67 630 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 LRRC57Q8N9N7 239 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 RNPEPQ9H4A4 650 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 VPS28Q9UK41 221 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 NBNO60934 754 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 MPOP05164 745 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 CDH2P19022 906 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-206ENST00000534320 CHKAP35790 457 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 ATXN3P54252 364 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-206ENST00000534320 PPP1R26Q5T8A7 1209 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-206ENST00000534320 TMC5Q6UXY8 1006 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 ARHGAP22Q7Z5H3 698 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 NRDE2Q9H7Z3 1164 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 GPAMQ9HCL2 828 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 XPNPEP1Q9NQW7 623 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 C5P01031 1676 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 CBX4O00257 560 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 NUDT2P50583 147 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 RASA2Q15283 850 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 PLEKHA7Q6IQ23 1121 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 CES3Q6UWW8 571 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 RINLQ6ZS11 566 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 IFNEQ86WN2 208 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 ERVK-5Q9HDB9 667 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 ABCC13Q9NSE7 274 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 CDH9Q9ULB4 789 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 RNF112Q9ULX5 631 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 PCDHA2Q9Y5H9 948 aa17.61■□□□□ 0.41
PHRF1-206ENST00000534320 A0A0A0MRY4 1105 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 GLP2RO95838 553 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 MMP3P08254 477 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 RBP1P09455 135 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 ST13P50502 369 aaKnown RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 SEL1L3Q68CR1 1132 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 KAT2BQ92831 832 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 SPATA13Q96N96 652 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 OR12D3Q9UGF7 316 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 LZTS3O60299 673 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 CALB2P22676 271 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 EPHB3P54753 998 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 PTAR1Q7Z6K3 402 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 ZNF513Q8N8E2 541 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 TRIM63Q969Q1 353 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 CPNE1Q99829 537 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 NXF3Q9H4D5 531 aaKnown RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 CYP4F12Q9HCS2 524 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 CSHL1Q14406 222 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 FAM110CQ1W6H9 321 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 KBTBD12Q3ZCT8 623 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 PTPN20Q4JDL3 420 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 PLEKHM3Q6ZWE6 761 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 B4GALNT2Q8NHY0 566 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 ZNF670Q9BS34 389 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 NDEL1Q9GZM8 345 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 DERAQ9Y315 318 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 PQBP1O60828 265 aaKnown RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 CABYRO75952 493 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 ENDOD1O94919 500 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 RTN3O95197 1032 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 OR1E1P30953 314 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 SCNN1BP51168 640 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 STX5Q13190 355 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 ZC3H12AQ5D1E8 599 aaKnown RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 LAYNQ6UX15 382 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 RNF217Q8TC41 542 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 CENPTQ96BT3 561 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 MRPL45Q9BRJ2 306 aaKnown RBP17.6■□□□□ 0.41
PHRF1-206ENST00000534320 SIX2Q9NPC8 291 aa17.6■□□□□ 0.41
PHRF1-206ENST00000534320 SMIM35A0A1B0GVV1 85 aa17.59■□□□□ 0.41
PHRF1-206ENST00000534320 BTBD19C9JJ37 291 aa17.59■□□□□ 0.41
PHRF1-206ENST00000534320 NFKBIEO00221 500 aa17.59■□□□□ 0.41
PHRF1-206ENST00000534320 CLASP2O75122 1294 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms