RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 ARL8BQ9NVJ2 186 aa3.87□□□□□ -1.79
RDX-215ENST00000533961 ASNSD1Q9NWL6 643 aa3.87□□□□□ -1.79
RDX-215ENST00000533961 CA14Q9ULX7 337 aa3.87□□□□□ -1.79
RDX-215ENST00000533961 HEMK1Q9Y5R4 338 aaPredicted RBP3.87□□□□□ -1.79
RDX-215ENST00000533961 HS3ST3B1Q9Y662 390 aa3.87□□□□□ -1.79
RDX-215ENST00000533961 FAM90A18PA6NE21 464 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 FAM90A16PA6NEW6 464 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 FAM90A9PA6NNJ1 464 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 FAM90A5PA8MXJ8 464 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 SYT5O00445 386 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 SLC3A2P08195 630 aaKnown RBP3.86□□□□□ -1.79
RDX-215ENST00000533961 FAM90A15PP0C7V4 464 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 FAM90A14PP0C7W9 464 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 CYP19A1P11511 503 aaPredicted RBP3.86□□□□□ -1.79
RDX-215ENST00000533961 NDUFS1P28331 727 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 IDUAP35475 653 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 SHC2P98077 582 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 B4GALNT1Q00973 533 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 ZNF91Q05481 1191 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 SF3A3Q12874 501 aaKnown RBP eCLIP3.86□□□□□ -1.79
RDX-215ENST00000533961 STIM1Q13586 685 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 CUL4BQ13620 913 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 CNGA3Q16281 694 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 GALNTL6Q49A17 601 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 LVRNQ6Q4G3 990 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 KLHL17Q6TDP4 642 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 SYT13Q7L8C5 426 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 CLASRPQ8N2M8 674 aaKnown RBP3.86□□□□□ -1.79
RDX-215ENST00000533961 HMGB4Q8WW32 186 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 AKAP1Q92667 903 aaKnown RBP eCLIP3.86□□□□□ -1.79
RDX-215ENST00000533961 TRMT61AQ96FX7 289 aaKnown RBP3.86□□□□□ -1.79
RDX-215ENST00000533961 RTKNQ9BST9 563 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 TUBB6Q9BUF5 446 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 TM2D2Q9BX73 214 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 CDCP1Q9H5V8 836 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 ELAC1Q9H777 363 aaKnown RBP3.86□□□□□ -1.79
RDX-215ENST00000533961 RMI1Q9H9A7 625 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 HELLSQ9NRZ9 838 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 FBXO28Q9NVF7 368 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 CNTN6Q9UQ52 1028 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 B3GNT3Q9Y2A9 372 aa3.86□□□□□ -1.79
RDX-215ENST00000533961 NOTCH4Q99466 2003 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 LOC105369274A0A096LPK9 316 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 LOC102723532A0A0G2JNH3 316 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 PRPF4O43172 522 aaKnown RBP eCLIP3.85□□□□□ -1.79
RDX-215ENST00000533961 KRT86O43790 486 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 HEXIM1O94992 359 aaKnown RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 PLAUP00749 431 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 PRF1P14222 555 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 ST6GAL1P15907 406 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 TFEBP19484 476 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 TBXAS1P24557 533 aaPredicted RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 MT3P25713 68 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 KCNJ4P48050 445 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 LINC00205P59089 165 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 TAS2R50P59544 299 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 RPL15P61313 204 aaKnown RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 CSHL1Q14406 222 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 KRT81Q14533 505 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 AAK1Q2M2I8 961 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 EARS2Q5JPH6 523 aaKnown RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 ARL6IP4Q66PJ3 421 aaKnown RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 ACSM6Q6P461 480 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 PIP4P1Q86T03 277 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 OR4N4Q8N0Y3 316 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 ANKRD42Q8N9B4 389 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 GLMPQ8WWB7 406 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 RUBCNQ92622 972 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 C3orf49Q96BT1 292 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 TBC1D20Q96BZ9 403 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 OSBPL5Q9H0X9 879 aaPredicted RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 PABPC3Q9H361 631 aaKnown RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 TP63Q9H3D4 680 aaPredicted RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 TAF1DQ9H5J8 278 aaPredicted RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.85□□□□□ -1.79
RDX-215ENST00000533961 SRP68Q9UHB9 627 aaKnown RBP3.85□□□□□ -1.79
RDX-215ENST00000533961 FBXO4Q9UKT5 387 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 SLC12A4Q9UP95 1085 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 PCDHA10Q9Y5I2 948 aa3.85□□□□□ -1.79
RDX-215ENST00000533961 SLC38A8A6NNN8 435 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 B9A039 149 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 F8W810 466 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 H0Y3Z8 333 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 IFRD1O00458 451 aaPredicted RBP3.84□□□□□ -1.79
RDX-215ENST00000533961 RPS6KB1P23443 525 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 HOXD12P35452 270 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 ARL13AQ5H913 290 aaPredicted RBP3.84□□□□□ -1.79
RDX-215ENST00000533961 LDHAL6AQ6ZMR3 332 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 Q6ZTC4 211 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 FAM57BQ71RH2 274 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 TRABD2AQ86V40 505 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 TTC30AQ86WT1 665 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 SLC44A2Q8IWA5 706 aaPredicted RBP3.84□□□□□ -1.79
RDX-215ENST00000533961 CCDC117Q8IWD4 279 aaPredicted RBP3.84□□□□□ -1.79
RDX-215ENST00000533961 OR52L2PQ8NGH6 319 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 IGFBPL1Q8WX77 278 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 CCT6BQ92526 530 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 KAT2BQ92831 832 aa3.84□□□□□ -1.79
RDX-215ENST00000533961 ZNF845Q96IR2 970 aaPredicted RBP3.84□□□□□ -1.79
RDX-215ENST00000533961 TRAPPC9Q96Q05 1148 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms