RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 GOLGA6AQ9NYA3 693 aa3.36□□□□□ -1.87
BRCA2-205ENST00000533776 PLK2Q9NYY3 685 aa3.36□□□□□ -1.87
BRCA2-205ENST00000533776 WNT16Q9UBV4 365 aa3.36□□□□□ -1.87
BRCA2-205ENST00000533776 FOXO6A8MYZ6 492 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PODXLO00592 558 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 NDST3O95803 873 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 VIPP01282 170 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 TGM2P21980 687 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PIK3CBP42338 1070 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PCYT1AP49585 367 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 DSCR9P59020 149 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 RPL36AP83881 106 aaKnown RBP3.35□□□□□ -1.87
BRCA2-205ENST00000533776 ZNF543Q08ER8 600 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 SLC5A9Q2M3M2 681 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PRAMEF19Q5SWL8 479 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 C14orf80Q86SX3 495 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 FMNL3Q8IVF7 1028 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PRR26Q8N8Z3 221 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 DNASE2BQ8WZ79 361 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 ZNF419Q96HQ0 510 aaPredicted RBP3.35□□□□□ -1.87
BRCA2-205ENST00000533776 URB1-AS1Q96HZ7 61 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 SLITRK1Q96PX8 696 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 SEZ6LQ9BYH1 1024 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 DCLK3Q9C098 648 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PLAC1Q9HBJ0 212 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 KRCC1Q9NPI7 259 aaPredicted RBP3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PRDM11Q9NQV5 511 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 PLSCR4Q9NRQ2 329 aa3.35□□□□□ -1.87
BRCA2-205ENST00000533776 CXorf65A6NEN9 183 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 OR2W5A6NFC9 320 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 INAFM1C9JVW0 142 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 NPC1O15118 1278 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 CAMTA2O94983 1202 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 IGKV3-20P01619 116 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 CYP1A2P05177 515 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 HOXC6P09630 235 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 SRGAP2BP0DMP2 458 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 IDEP14735 1019 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 EGR1P18146 543 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 SHC2P98077 582 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 ROR2Q01974 943 aaKnown RBP3.34□□□□□ -1.87
BRCA2-205ENST00000533776 PMPCAQ10713 525 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 IZUMO4Q1ZYL8 232 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 CYB5RLQ6IPT4 315 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 MSANTD2Q6P1R3 559 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 BEND5Q7L4P6 421 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 CUZD1Q86UP6 607 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 PAQR4Q8N4S7 273 aaPredicted RBP3.34□□□□□ -1.87
BRCA2-205ENST00000533776 SRFBP1Q8NEF9 429 aaKnown RBP3.34□□□□□ -1.87
BRCA2-205ENST00000533776 NPIPB3Q92617 1050 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 PHF21BQ96EK2 531 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 SNX27Q96L92 541 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 MAGEH1Q9H213 219 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 METTL14Q9HCE5 456 aaKnown RBP3.34□□□□□ -1.87
BRCA2-205ENST00000533776 NCKIPSDQ9NZQ3 722 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 TBC1D14Q9P2M4 693 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 MYO1AQ9UBC5 1043 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 UBE2J1Q9Y385 318 aaPredicted RBP3.34□□□□□ -1.87
BRCA2-205ENST00000533776 PCDHB7Q9Y5E2 793 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 PCDHGB1Q9Y5G3 927 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 PTGDR2Q9Y5Y4 395 aa3.34□□□□□ -1.87
BRCA2-205ENST00000533776 A0A1B0GVT2 93 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 BECN2A8MW95 431 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 J3KTA2 159 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 RGS14O43566 566 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 TSHRP16473 764 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 ATF3P18847 181 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 GABRB3P28472 473 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 GAS1P54826 345 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 GPR18Q14330 331 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 ENTPD8Q5MY95 495 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 Q5PR19 223 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 C9orf50Q5SZB4 431 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 GFI1BQ5VTD9 330 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 WDR93Q6P2C0 686 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 RTL10Q7L3V2 364 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 RNF152Q8N8N0 203 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 TTC8Q8TAM2 541 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 LMO3Q8TAP4 145 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 SLC22A17Q8WUG5 538 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 NR4A3Q92570 626 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 TIFAQ96CG3 184 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 NUDT22Q9BRQ3 303 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.33□□□□□ -1.88
BRCA2-205ENST00000533776 C6orf106Q9H6K1 298 aaPredicted RBP3.33□□□□□ -1.88
BRCA2-205ENST00000533776 FSCN3Q9NQT6 498 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 MAN2B2Q9Y2E5 1009 aa3.33□□□□□ -1.88
BRCA2-205ENST00000533776 A0A087WYN8 130 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 A0A1W2PPC4 97 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 GAGE12JA6NER3 117 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 OR6C75A6NL08 312 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 APOL1O14791 398 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 GRID2O43424 1007 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 NEURL1O76050 574 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 PARNO95453 639 aaKnown RBP3.32□□□□□ -1.88
BRCA2-205ENST00000533776 KLKB1P03952 638 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 ITGA5P08648 1049 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 STT3AP46977 705 aa3.32□□□□□ -1.88
BRCA2-205ENST00000533776 COMPP49747 757 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms